Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 91.5 1e-12
>seq2289
Length=32595
Score = 91.5 bits (100), Expect = 1e-12
Identities = 156/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | ||| ||||| ||| |||| ||| ||||| || | ||||| |
Sbjct 1427 AGACGGAGAACCAAATGCAGGGTCGACTCCTTTTG--AATGTTGTAGTCCGACAGAGTGC 1484
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
||| || || || || || ||||| || || | ||||| || ||||||||||| |
Sbjct 1485 GGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCT 1544
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433
| || || ||||| || || || ||||| ||||||| ||| | || || ||
Sbjct 1545 CCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAG-ATGATTCCACCTCAAGC 1603
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| || || || |||||||| || || ||||| ||||||
Sbjct 1604 GTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCATA 1645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029131053213310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |