Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2289 91.5 1e-12 >seq2289 Length=32595 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | ||| ||||| ||| |||| ||| ||||| || | ||||| | Sbjct 1427 AGACGGAGAACCAAATGCAGGGTCGACTCCTTTTG--AATGTTGTAGTCCGACAGAGTGC 1484 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| || || || || || ||||| || || | ||||| || ||||||||||| | Sbjct 1485 GGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCT 1544 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || || ||||| || || || ||||| ||||||| ||| | || || || Sbjct 1545 CCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAG-ATGATTCCACCTCAAGC 1603 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || || |||||||| || || ||||| |||||| Sbjct 1604 GTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCATA 1645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029131053213310