Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2657 221 2e-52 seq3051 206 5e-48 >seq2657 Length=10989 Score = 221 bits (244), Expect = 2e-52 Identities = 798/1225 (65%), Gaps = 49/1225 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| |||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 2643 GTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGA 2702 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||| | || || | | || | || || || ||||| || || | | Sbjct 2703 GAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACGGCA 2762 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTC 221595 | |||||||| | |||| ||| | | || || ||||| || |||||||||| Sbjct 2763 ACTGGCCTGTGACGGAAGTTGCT-GCGTTTGGCCTCCGGGACGGGGTAGTAGTTGACGTC 2821 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 || | || || | |||| |||| ||| |||| || | || || | || Sbjct 2822 AATGATCTTATTCAAGTTCT------TGAC---AACAACCTGTGTGACCTCGTGAAGCTT 2872 Query 221656 GAACACCAACTCGCC---GCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 | || ||| ||||| | | | || ||| | | ||||||| | Sbjct 2873 ---CTGGAAGTCGTATGTGCCGTTGGCCATG---TCAACATATGTCGGCAGGGCAAGGGA 2926 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||| |||||||||||| ||||| || | | |||| | |||||||| || || Sbjct 2927 TGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAG 2986 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || |||||| || |||| || || || |||||| ||| || ||||| Sbjct 2987 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTT 3046 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| | ||| || || || ||||| ||||| | | ||||| || ||| || | Sbjct 3047 GTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT- 3105 Query 221893 TCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 ||||| || | ||| | | |||||| ||| || || || |||||| Sbjct 3106 TCTGGGCCTTGATAGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCCCTCGTAGAGCG 3162 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011 || |||| || ||||| | || ||| || || || | ||| ||||| || Sbjct 3163 CCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGG 3222 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 |||||| ||| | | ||| | || ||||||||| ||||| ||||| || || | | Sbjct 3223 TCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGA 3282 Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131 | | || | || || |||||| ||||| ||| ||||||| |||| ||||||| Sbjct 3283 ACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAA 3342 Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191 | | || |||||||| ||||| | |||| ||| | ||| || || ||||||||||||| Sbjct 3343 AGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCAC 3402 Query 222192 CCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 | || || || ||| | | | | |||||| | ||| || | || || | ||||| Sbjct 3403 CTTGGTCAACGTACCT-TGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTC 3461 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CAGAC 222307 || |||||||| || |||||| ||||| ||| | || ||| ||| | | Sbjct 3462 GAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATACGGTGGATATTC 3518 Query 222308 ATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 | |||||||| || || || ||| ||||||||||| || ||||||| ||||| ||| Sbjct 3519 AATCCGATACCTCCAGCAGTCTTT-GAGATCATGGCACAAGTCTTGAGTGTGTCATAGAT 3577 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGG 222425 ||||| ||| |||||||| | || | || || || ||||| | ||| | | ||| Sbjct 3578 ACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGG 3637 Query 222426 TGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGAT 222485 || | || || || || || || || |||||||| ||||| |||||| || | Sbjct 3638 TGTACCA-GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGT 3696 Query 222486 CGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 ||| ||||| | | || | | || | || |||||||| || || | ||| Sbjct 3697 TGTATGTCTCGATTGTCT-TCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATA 3755 Query 222545 TACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGGTACGATT 222599 ||||| ||| ||||||| ||| | ||||| || ||||| ||||| ||| Sbjct 3756 ATCATGTGCTGTGGCCTCT---CAGCAACCTTGCCATCAAGTCGGAGA--AGGTAGGATC 3810 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTA 222624 ||||| |||||||| || ||||| Sbjct 3811 GCTCCAGGGTCTTGAAGCCGAAGTA 3835 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| | ||| | ||| |||||| | || |||| |||||| || ||| || || Sbjct 2300 CATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGCAGCCAGGGGTTGACGAC 2359 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 |||||| || || | || || | | | ||| | ||| || ||| | || |||| || Sbjct 2360 TTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCA 2419 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||| ||| |||||||| | ||| ||| |||||||||||||| || ||||| Sbjct 2420 CTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAACGAGCAGGGA 2479 Query 221245 GTTGCG 221250 |||||| Sbjct 2480 GTTGCG 2485 >seq3051 Length=56537 Score = 206 bits (228), Expect = 5e-48 Identities = 562/860 (65%), Gaps = 16/860 (2%) Strand=Plus/Plus Query 25471 AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATT 25530 ||| | || ||| |||||||||||||||| || || |||||| || || |||||| Sbjct 42541 AAATAGATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATT 42600 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| |||||||| | ||| |||| || || ||| || || ||| | || Sbjct 42601 GATCTCTCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTC 42660 Query 25591 AAGTACG-TGTTG--GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 | | | |||| || ||||| || || ||||| || || || |||||||| || | Sbjct 42661 ATCTCCCATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTC 42720 Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| | |||| ||| || || ||| | || ||| || |||||||||||||| || Sbjct 42721 GAGCGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATC 42780 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764 ||||| || | ||| | ||| || || || || || || ||||| | Sbjct 42781 ATGATCGAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAG 42837 Query 25765 GACGTCGC-CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 || || | | || || || || |||||||||| ||| || ||||||||| Sbjct 42838 GAGCAGGCTCAACGGACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAA 42896 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||| | | ||||||| | || |||| |||| |||| || Sbjct 42897 GAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCT 42956 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || ||||| |||||||| ||||| ||||| ||| ||| || || || |||| ||||| Sbjct 42957 CGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTG 43016 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || |||| | || ||| ||| || |||||||||||| | | || Sbjct 43017 GCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGA 43076 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||||||||||||| || || |||||||| |||| | | |||| | ||| || Sbjct 43077 TGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTC---CCACCTTAGACAC-CGCC 43132 Query 26064 TTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 |||| || ||||| | |||| | |||||||| |||||| | ||||| Sbjct 43133 CAAGCAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCT 43192 Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182 | ||||||||| || | |||| ||||||| Sbjct 43193 TGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACA 43252 Query 26183 TTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242 |||||| || |||||| |||||| | || || || | ||||| || Sbjct 43253 TTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGA 43312 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| ||||| || ||||| ||||| || ||| ||| |||||||||||||| || | Sbjct 43313 CCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGA 43372 Query 26303 AGAGGGTCGGCGACTATCAA 26322 || | |||| |||||| ||| Sbjct 43373 AGCGCGTCGCCGACTACCAA 43392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928808586663360