Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2857 134 2e-25 seq3051 131 2e-24 seq2359 122 1e-21 seq2657 95.1 1e-13 seq2036 89.7 6e-12 >seq2857 Length=13841 Score = 134 bits (148), Expect = 2e-25 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177 ||||||| | ||||||| || |||| ||| | ||||| ||| | ||||| ||| Sbjct 1918 CGACATCGAGGAGTGGGACCAGAAGTTCATGCAA-GTCGACCAGGAGATGCTCTTCGAGA 1976 Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 | ||||||||| |||||||||| ||||||||||| || |||||| | ||||||||| | | Sbjct 1977 TCATCCTCGCCTCCAACTACCTTGACATCAAGCCCCTCCTCGATGTGGGGTGCAAGACCG 2036 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 |||| || ||||| ||||| ||| || ||||||||| | ||||| ||||| || | | Sbjct 2037 TGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAGATCAGGAAGACGTTTAATATTACGA 2096 Query 1592298 ACG 1592300 ||| Sbjct 2097 ACG 2099 >seq3051 Length=56537 Score = 131 bits (144), Expect = 2e-24 Identities = 186/256 (73%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| ||||| | ||||||||| |||||||||||||| || |||| | ||| ||| Sbjct 43052 AAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCG 42993 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329 ||||| ||||| ||||| || || || ||| | | ||| |||| |||||| || || Sbjct 42992 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAG--GTAGAAT 42935 Query 869330 CCCT-CCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388 || | |||| ||||||| | | |||||||||||||| ||| | | | || | || Sbjct 42934 CCTTATCTTG--GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGT 42877 Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 |||||||| ||||||| |||| || ||| | ||||||| || |||||||| | Sbjct 42876 CTCGATGGCATTGAAGAGGTATGTCC-GTTGAGCCTGCTCCTTGATGTATGTGTCGATGA 42818 Query 869448 GGAGCGAATAGGTCTC 869463 |||| || || ||||| Sbjct 42817 GGAGGGAGTATGTCTC 42802 Score = 129 bits (142), Expect = 7e-24 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 43389 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCAT 43330 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||||| ||| ||| ||||| || ||||| | Sbjct 43329 GAAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCT 43270 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| ||||| Sbjct 43269 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 43210 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | ||| ||| ||||||| |||||| ||| |||||| Sbjct 43209 GGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCG 43164 Score = 87.8 bits (96), Expect = 2e-11 Identities = 170/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||| ||||||||||| ||| ||||| ||||| ||| | | |||| | ||||| Sbjct 42798 GTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGAC 42739 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 ||| | |||| || || ||||||||| || || ||||| |||||||| || Sbjct 42738 CTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAA 42679 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA--CACCCAGTGGAC 869811 ||| || || || ||| |||| |||||| || || ||| |||| ||||| | Sbjct 42678 AGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTG 42619 Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 ||| | ||| || | |||||| || ||||||| || || || ||||| ||||| Sbjct 42618 AAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTTCTTGTA 42559 Query 869872 CATCTCCCA 869880 ||||| ||| Sbjct 42558 CATCTGCCA 42550 >seq2359 Length=48333 Score = 122 bits (134), Expect = 1e-21 Identities = 122/157 (78%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| || || ||||| | ||||| || || ||||||||| Sbjct 34280 GACAGCATCGGTGGCACCGTCACCTGCGTCATCAGGAACGTCCCCAGCGGTCTCGGCGAG 34339 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||||| |||||| |||||||||||||||||| ||||| |||||| Sbjct 34340 CCCTGCTTCGACAAGATGGAGGCCATGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 34399 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| || ||||| ||| ||| || |||| |||| Sbjct 34400 AAGGGTTTTGAGATCGGCTCCGGCTTCGGCGGCTGCG 34436 Score = 118 bits (130), Expect = 1e-20 Identities = 267/399 (67%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 || || |||||||||||| | || || | || |||||| |||| ||| || || Sbjct 33649 CAGCTATGGCGAGTCGCATTGT-CGCTCGGTGGGATGCATCGTCGATGGCTGCCCCCCAG 33707 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 | ||| || |||| ||||| |||||||||||| || || |||||||| |||||| Sbjct 33708 GAATGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACCCGTCGCCGACCCGGCCAGA 33767 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 |||| || | || || ||| | ||| || | ||| ||||| || ||||| ||| Sbjct 33768 GCGCCCTGACGACTCCCCGCGATGAGAAGGACCAGGTCGAAATCCACTCTGGCACCGAGT 33827 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 |||| |||| || || | ||| ||||| | | || ||||| |||||||| || Sbjct 33828 TCGGCGTCACCCTGGGTACCCCCATCGGCATGCTCGTCCGCAACCAGGACCAGCGCCCTA 33887 Query 18332 TCGACT------ATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385 |||| | || |||| | | ||||| || || || ||||||| || | Sbjct 33888 AGGACTACGGAAACTCGACCATGGACCTCTTCCCGCGCCCATCGCATGCCGACTGGACAT 33947 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || | | ||||||||| ||||||| |||||||| || || || || ||||||| Sbjct 33948 ACCTCGAGAAGTACGGCGTCAAGGCCAGCTCGGGCGGTGGGCGCAGCTCCGCGCGCGAGA 34007 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAAT 18484 | | | | || || ||||| ||| | || || |||| Sbjct 34008 CTATTGGGAGAGTGGCTGCCGGTGCGATTGCGGACAAAT 34046 >seq2657 Length=10989 Score = 95.1 bits (104), Expect = 1e-13 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| || ||||||||||| || || | |||||| || Sbjct 3405 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 3464 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 3465 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 3524 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | ||| ||||| | || || ||||| ||||| ||||| ||||| Sbjct 3525 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 3584 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || |||||||||| || | ||||| ||||| || | || | || || Sbjct 3585 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCA 3644 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 3645 GCATTGAAGAGTGTTGG 3661 >seq2036 Length=12697 Score = 89.7 bits (98), Expect = 6e-12 Identities = 129/176 (73%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 733083 CCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGTG 733142 |||||| | ||||||||| | || || |||||||| |||||||| ||| || | | Sbjct 12089 CCCGAGCTCGGCGACAAATTCTCCTCCCGCCACGGGCAAAAGGGAGTCGTTGGACTCAT- 12147 Query 733143 CGCTCCA-CCGAGGACATGCCCTGGTCGCCG-CGCGGCGGCGCCACGCCCGACATCGTGA 733200 ||| || || ||||| | |||| |||| | | ||| || ||||||||||||| | | Sbjct 12148 CGCCCCGGCCCAGGACCTCCCCT--TCGCAGACACGG--GCATCACGCCCGACATCATCA 12203 Query 733201 TCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTC 733256 | ||||| |||| |||| || || ||||| | ||||||||||| ||| |||| Sbjct 12204 TGAACCCCCACGGTTTCCCCTCCCGTATGACAGTCGGCAAGATGCTGGAGCTCCTC 12259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106883240253723