Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2857 134 2e-25
seq3051 131 2e-24
seq2359 122 1e-21
seq2657 95.1 1e-13
seq2036 89.7 6e-12
>seq2857
Length=13841
Score = 134 bits (148), Expect = 2e-25
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177
||||||| | ||||||| || |||| ||| | ||||| ||| | ||||| |||
Sbjct 1918 CGACATCGAGGAGTGGGACCAGAAGTTCATGCAA-GTCGACCAGGAGATGCTCTTCGAGA 1976
Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237
| ||||||||| |||||||||| ||||||||||| || |||||| | ||||||||| | |
Sbjct 1977 TCATCCTCGCCTCCAACTACCTTGACATCAAGCCCCTCCTCGATGTGGGGTGCAAGACCG 2036
Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297
|||| || ||||| ||||| ||| || ||||||||| | ||||| ||||| || | |
Sbjct 2037 TGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAGATCAGGAAGACGTTTAATATTACGA 2096
Query 1592298 ACG 1592300
|||
Sbjct 2097 ACG 2099
>seq3051
Length=56537
Score = 131 bits (144), Expect = 2e-24
Identities = 186/256 (73%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269
|||| ||||| | ||||||||| |||||||||||||| || |||| | ||| |||
Sbjct 43052 AAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCG 42993
Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329
||||| ||||| ||||| || || || ||| | | ||| |||| |||||| || ||
Sbjct 42992 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAG--GTAGAAT 42935
Query 869330 CCCT-CCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388
|| | |||| ||||||| | | |||||||||||||| ||| | | | || | ||
Sbjct 42934 CCTTATCTTG--GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGT 42877
Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447
|||||||| ||||||| |||| || ||| | ||||||| || |||||||| |
Sbjct 42876 CTCGATGGCATTGAAGAGGTATGTCC-GTTGAGCCTGCTCCTTGATGTATGTGTCGATGA 42818
Query 869448 GGAGCGAATAGGTCTC 869463
|||| || || |||||
Sbjct 42817 GGAGGGAGTATGTCTC 42802
Score = 129 bits (142), Expect = 7e-24
Identities = 164/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| ||| | |||||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 43389 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCAT 43330
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| ||||||| || |||||||| ||| ||| ||||| || ||||| |
Sbjct 43329 GAAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCT 43270
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
||||||||| ||||| ||||| || ||| | | |||||||||||||| |||||
Sbjct 43269 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 43210
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924
|| || | ||| ||| ||||||| |||||| ||| ||||||
Sbjct 43209 GGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCG 43164
Score = 87.8 bits (96), Expect = 2e-11
Identities = 170/249 (68%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694
||| ||||||||||| ||| ||||| ||||| ||| | | |||| | |||||
Sbjct 42798 GTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGAC 42739
Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754
||| | |||| || || ||||||||| || || ||||| |||||||| ||
Sbjct 42738 CTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAA 42679
Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA--CACCCAGTGGAC 869811
||| || || || ||| |||| |||||| || || ||| |||| ||||| |
Sbjct 42678 AGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTG 42619
Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871
||| | ||| || | |||||| || ||||||| || || || ||||| |||||
Sbjct 42618 AAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTTCTTGTA 42559
Query 869872 CATCTCCCA 869880
||||| |||
Sbjct 42558 CATCTGCCA 42550
>seq2359
Length=48333
Score = 122 bits (134), Expect = 1e-21
Identities = 122/157 (78%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || ||||| | ||||| || || |||||||||
Sbjct 34280 GACAGCATCGGTGGCACCGTCACCTGCGTCATCAGGAACGTCCCCAGCGGTCTCGGCGAG 34339
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||||| |||||| |||||||||||||||||| ||||| ||||||
Sbjct 34340 CCCTGCTTCGACAAGATGGAGGCCATGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 34399
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| || ||||| ||| ||| || |||| ||||
Sbjct 34400 AAGGGTTTTGAGATCGGCTCCGGCTTCGGCGGCTGCG 34436
Score = 118 bits (130), Expect = 1e-20
Identities = 267/399 (67%), Gaps = 8/399 (2%)
Strand=Plus/Plus
Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCCGCCGT 18151
|| || |||||||||||| | || || | || |||||| |||| ||| || ||
Sbjct 33649 CAGCTATGGCGAGTCGCATTGT-CGCTCGGTGGGATGCATCGTCGATGGCTGCCCCCCAG 33707
Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211
| ||| || |||| ||||| |||||||||||| || || |||||||| ||||||
Sbjct 33708 GAATGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACCCGTCGCCGACCCGGCCAGA 33767
Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271
|||| || | || || ||| | ||| || | ||| ||||| || ||||| |||
Sbjct 33768 GCGCCCTGACGACTCCCCGCGATGAGAAGGACCAGGTCGAAATCCACTCTGGCACCGAGT 33827
Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331
|||| |||| || || | ||| ||||| | | || ||||| |||||||| ||
Sbjct 33828 TCGGCGTCACCCTGGGTACCCCCATCGGCATGCTCGTCCGCAACCAGGACCAGCGCCCTA 33887
Query 18332 TCGACT------ATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385
|||| | || |||| | | ||||| || || || ||||||| || |
Sbjct 33888 AGGACTACGGAAACTCGACCATGGACCTCTTCCCGCGCCCATCGCATGCCGACTGGACAT 33947
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | | ||||||||| ||||||| |||||||| || || || || |||||||
Sbjct 33948 ACCTCGAGAAGTACGGCGTCAAGGCCAGCTCGGGCGGTGGGCGCAGCTCCGCGCGCGAGA 34007
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAAT 18484
| | | | || || ||||| ||| | || || ||||
Sbjct 34008 CTATTGGGAGAGTGGCTGCCGGTGCGATTGCGGACAAAT 34046
>seq2657
Length=10989
Score = 95.1 bits (104), Expect = 1e-13
Identities = 175/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| | || |||| ||| || ||||||||||| || || | |||||| ||
Sbjct 3405 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 3464
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||||| || || | ||| || || | ||| || | ||| || |||
Sbjct 3465 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 3524
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || || || | ||| ||||| | || || ||||| ||||| ||||| |||||
Sbjct 3525 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 3584
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| || |||||||||| || | ||||| ||||| || | || | || ||
Sbjct 3585 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCA 3644
Query 1630306 GCGTTGAAGAGCGTGGG 1630322
|| |||||||| || ||
Sbjct 3645 GCATTGAAGAGTGTTGG 3661
>seq2036
Length=12697
Score = 89.7 bits (98), Expect = 6e-12
Identities = 129/176 (73%), Gaps = 7/176 (4%)
Strand=Plus/Plus
Query 733083 CCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGTG 733142
|||||| | ||||||||| | || || |||||||| |||||||| ||| || | |
Sbjct 12089 CCCGAGCTCGGCGACAAATTCTCCTCCCGCCACGGGCAAAAGGGAGTCGTTGGACTCAT- 12147
Query 733143 CGCTCCA-CCGAGGACATGCCCTGGTCGCCG-CGCGGCGGCGCCACGCCCGACATCGTGA 733200
||| || || ||||| | |||| |||| | | ||| || ||||||||||||| | |
Sbjct 12148 CGCCCCGGCCCAGGACCTCCCCT--TCGCAGACACGG--GCATCACGCCCGACATCATCA 12203
Query 733201 TCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTC 733256
| ||||| |||| |||| || || ||||| | ||||||||||| ||| ||||
Sbjct 12204 TGAACCCCCACGGTTTCCCCTCCCGTATGACAGTCGGCAAGATGCTGGAGCTCCTC 12259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106883240253723
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |