Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2657 120 3e-22 seq2289 116 3e-21 >seq2657 Length=10989 Score = 120 bits (132), Expect = 3e-22 Identities = 1050/1676 (63%), Gaps = 60/1676 (4%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG-CGGTATTGTTGCA-ATATTTT 138415 |||||||| ||||||||||| || | || |||| ||| ||||| ||||| | Sbjct 2208 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT--GTCGGCGGGGATGTTGGGGATATTCT 2265 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | ||| ||| | | || |||||||| || |||||| ||| | ||| || | Sbjct 2266 GGATGGAGCCGCCGTCTGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGT 2325 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || || ||| || | ||| | ||| | ||| || || || ||||||| || || | Sbjct 2326 CGACCAGGTCCTTGAGCAGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGC 2385 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| ||||| |||| | ||||| || | |||||| || || ||||| | | Sbjct 2386 GCGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGG 2445 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 ||| || || |||||| || || | || || || || | |||||| ||||||| Sbjct 2446 TGGAGGCAGTGGGCATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCT 2505 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | ||||||| || ||||||||||| ||| |||| | | |||||| ||||| | Sbjct 2506 GGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATGTCGTATT 2565 Query 138716 GTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAATCGTATACACC-AAACTC 138770 | | | ||| | ||| |||| || ||||| | |||||| || | || Sbjct 2566 GGAGCTCACCCTTGGACACT--GGGGA--TCCCTCGTAAGTCTCGTATGTGCCGTGAATC 2621 Query 138771 TTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTG 138830 || |||| ||| | || | ||||| | ||| || || ||| ||||| Sbjct 2622 -TGGGCCAGCTCCACGGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGA 2680 Query 138831 ATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGC 138890 ||||| || |||||||| ||| | || | |||||| | ||| || || || Sbjct 2681 GTTGAGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGC 2740 Query 138891 CAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTC 138950 || || || || || || | || || | || || | | ||| || |||| | || | Sbjct 2741 AAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGA-AGTTGCTGCGTTTG-GCCTCC 2798 Query 138951 --GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTC 139008 || || || ||||| || || ||||| || || || || || || |||| || Sbjct 2799 GGGACGGGGTAGTAGTTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGT- 2857 Query 139009 GTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAA 139067 | | | || | | | || |||||||||| ||| | | | ||| || | Sbjct 2858 GACCTCGTGAAGCTTCTGGAAGTCGTATGTGC---------CGTTGGCCATGTCAAC--A 2906 Query 139068 TTTGTTGACA--CAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTAT 139125 | ||| | || || || || | ||| ||||| || || || || ||| | ||| Sbjct 2907 TATGTCGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTAC 2966 Query 139126 TCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTT 139185 |||||||| || | |||| || | ||| ||||| | || | || ||||| Sbjct 2967 TCGACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTC 3026 Query 139186 TTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCT 139245 || ||||| || ||||| ||||| | ||| | || | || || || || | ||| Sbjct 3027 TTGCGGTTGCAGGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCG 3086 Query 139246 ATAATGAATTTGAACAAGTCCCTAG--CTTG-TA-TTTGACGCACGTAAAGTTCGTCGCG 139301 | |||| | | | ||| || | |||| || | | || | | | | || Sbjct 3087 AGAATGGAGTACCA-AAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTA---CCCTCCTT 3142 Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 |||||| |||||||| | ||||| || ||||| | || | | | | || Sbjct 3143 CTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCA 3202 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | || || |||||||| | ||| |||||||| || ||| ||| ||||||| ||||| Sbjct 3203 TTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 3262 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 ||||||||| | ||| | | ||| || || || || ||| || ||| Sbjct 3263 CGGAATCCAGAGAGCATAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 3322 Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541 ||| || ||||| ||||| || || ||||||||||| || | |||||||| | || Sbjct 3323 CCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGC 3382 Query 139542 GCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598 || || ||||||||||| || |||| | | | | || ||||| ||||| | Sbjct 3383 ACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAG 3442 Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAG 139654 ||| || | | ||| ||| |||||||||| || | | ||| | || | Sbjct 3443 CATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGT----GG 3498 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA- 139713 | |||| || | ||| | ||||| || || || || || || | | ||| Sbjct 3499 CACGGATACGGTGGATATTCAATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAG 3558 Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCAT 139773 || | | ||| || || ||||| || || || |||| ||| ||||| ||||| Sbjct 3559 TCTTG-AGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 3617 Query 139774 GACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA- 139832 |||||||| || | || || || || || || || || ||||| ||||| Sbjct 3618 GACGAAAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAG 3677 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892 ||||| ||||| | | ||| || ||||| | || |||||||| ||||| || Sbjct 3678 TATTTG-GAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCACCGTGAAT 3736 Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952 || || | || ||||| | ||| || || || || || ||| ||| || | | Sbjct 3737 GCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGTCG 3796 Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || | || ||| ||||||||| |||| ||||| ||||||||||| Sbjct 3797 GAGAAGGTAGGATCG--CTCCAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAATC 3850 >seq2289 Length=32595 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || || |||||||| || || ||| | | Sbjct 1644 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCT 1585 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || ||||| ||||| || || Sbjct 1584 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAG 1525 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || |||||||||||| | | |||| || || ||| Sbjct 1524 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1465 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| ||||| || || ||||| Sbjct 1464 ATTCAAAAGGAGTCGACCCTGCATTTGGT 1436 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || ||||| || || || || |||||| ||||||| ||||| || Sbjct 2016 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 1957 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || ||||| | | | | || || || ||||| || ||||| ||||| || ||| Sbjct 1956 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 1897 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | || | ||||| || Sbjct 1896 TTGGTCCTCCGTCTTCGCGGTGG 1874 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || |||||||| ||||| || | | Sbjct 1416 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1357 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || || || || || || || || Sbjct 1356 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 1297 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| |||||| | | | |||| || || ||| Sbjct 1296 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAAC 1237 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || || ||||| |||| Sbjct 1236 ATCCAGAAGGAGTCTACGCTACATCTTG 1209 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || || | || Sbjct 1872 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 1813 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 1812 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 1753 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| ||||| | | | || || || ||| Sbjct 1752 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAAC 1693 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| || |||||||| | || | ||||| || Sbjct 1692 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGCGGTGG 1646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449880059617320