Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3051 149 1e-29 seq2657 136 6e-26 seq2857 132 8e-25 seq2804 123 4e-22 seq2884 98.7 2e-14 seq2036 91.5 2e-12 >seq3051 Length=56537 Score = 149 bits (164), Expect = 1e-29 Identities = 211/292 (72%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| | ||||||||| |||||||||||||| || |||| ||| ||| ||||| Sbjct 43046 AGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAG 42987 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||| || || || ||| | ||||| |||| ||||| || | || | | Sbjct 42986 AAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAA--GGTAGAATCCTTAT 42929 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 | | ||||||| | | ||||| || ||||| ||| | | | || | || |||||| Sbjct 42928 CT-TGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 42870 Query 794557 GCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 || ||||||| |||| | | || | ||||||| ||| |||||||||||||| || Sbjct 42869 GCATTGAAGAGGTATGTCCGT-TGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGA 42811 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||||| | ||| ||||| ||||| ||| ||||| || || |||||| Sbjct 42810 GTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 42759 Score = 131 bits (144), Expect = 3e-24 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 43388 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 43329 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| || | ||||| ||||||| ||||| || ||||| | | Sbjct 43328 AAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 43269 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 43268 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 43209 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||||| |||||| ||| |||||| | |||| Sbjct 43208 GGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGA 43157 >seq2657 Length=10989 Score = 136 bits (150), Expect = 6e-26 Identities = 358/540 (66%), Gaps = 20/540 (4%) Strand=Plus/Plus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 || |||||||| || ||||||| | || ||| | | |||||| || |||||||| ||| Sbjct 2004 TGATCGACGGTGAATTGGATGGGGGCGGAGGCGGCCATGGTGCGGAGGTAGTACATTCCG 2063 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGC-ATTC-- 2069367 |||||||||||| | ||| | |||||| || ||||| || | | ||| Sbjct 2064 GTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTGAT---CTTGCCCATTGTT 2120 Query 2069368 GGGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 ||| | || || |||||| |||||| || |||| ||| |||||||||| Sbjct 2121 GGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAGGCGCCGCGGTCGGCG 2180 Query 2069428 GCCATGT---CGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTG 2069484 ||||| | ||||||| ||| | ||| | |||||| ||||||||| | ||||||||| Sbjct 2181 GCCATCTGGACGATGGT---GCGCTGGGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTG 2237 Query 2069485 AGATGCGGCGGC-ACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAG 2069543 | | |||||| | | | | || ||| | ||||| ||||||||| Sbjct 2238 ATGT-CGGCGGGGATGTTGGGGATATT------CTGGATGGAGCCGCCGTCTGCGATGAT 2290 Query 2069544 GCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCG 2069603 ||||| | || | | ||| || || | | || | || || ||| | | Sbjct 2291 GCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGCAGCCAGGG 2350 Query 2069604 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGAC 2069663 |||||| || || ||||| | || || ||||||| ||||||||| ||| | Sbjct 2351 GTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTAGGG 2410 Query 2069664 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 2069723 |||| | |||| || ||| |||||||| || || | ||| ||||||||| | || || Sbjct 2411 CTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAAC 2470 Query 2069724 GAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCA 2069783 |||||| |||||||| | |||| ||| | | | ||| || | |||||||||||| Sbjct 2471 GAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCA 2530 Score = 89.7 bits (98), Expect = 8e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | || |||| ||| || ||||||||||| || |||| |||||| || Sbjct 3405 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 3464 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 3465 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 3524 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 3525 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 3584 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 3585 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCA 3644 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 3645 GCATTGAAGAGTGTTGG 3661 >seq2857 Length=13841 Score = 132 bits (146), Expect = 8e-25 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct 1967 CTCTTCGAGATCATCCTCGCCTCCAACTACCTTGACATCAAGCCCCTCCTCGATGTGGGG 2026 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||||||||| || | || ||||| ||| || ||||| ||| | ||||| ||| Sbjct 2027 TGCAAGACCGTGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAGATCAGGAAGACGTTT 2086 Query 2035749 AACATCAAGTACG 2035761 || || | | ||| Sbjct 2087 AATATTACGAACG 2099 >seq2804 Length=3112 Score = 123 bits (136), Expect = 4e-22 Identities = 326/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 || |||| |||||||| | ||| || ||||| ||||| || ||||||||||||| | Sbjct 647 GCGAAGGTGAAGATCTTCCTCTGATCCACGCCGCCGAACTGCGCATCGACGTCGAGGTAC 588 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTG-CGGTC 2411621 ||||| || || ||||||||||| ||||| | || | |||| ||||| | |||| Sbjct 587 TGCTCATCCAGCGCCTGCATGAGGGGGTAAATCAGCCCCCCCAGCGTCGGGTCGTCGGT- 529 Query 2411622 CATCTTGACCACCTGGGCGGCGGCCTTTTGCGCCGTGCCGACGGTCACG-CGCGCCGTC- 2411679 | ||| || || | ||| ||||||| || || || || | | || | |||| || Sbjct 528 CTGCTTTACTACTTCCGCGCCGGCCTTCTGGGCGACGCTGATG--CGCGTCACGCCTTCG 471 Query 2411680 AGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAAT 2411739 || ||| |||| | |||||| | ||| ||||||| |||||| | || ||| Sbjct 470 AGCTTGAAGCGGTCCATGGTGTAGTCCTTGCCTAGCTGGTAGGAGCTGCCTAGTACGAAT 411 Query 2411740 TCGAGACGATCCAGCGG--GACGCCAATGTGCTGGAGCATGGCCTTGAT-GGCAAACTCG 2411796 ||||| || || || ||||| | | |||| | || ||||| || || | Sbjct 410 TCGAG--GAGGGAGAGGTCCACGCCGACGGCGCGGAGGAGCGCTTTGATCAGCCGGCT-G 354 Query 2411797 TACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGC-CATTGTCGAGGTGGG 2411854 || | ||||| ||| ||||||||| | | | || | ||| | || ||||||| | Sbjct 353 TAGTAGGCGGC-GCGGAACTCGACGAGCT-CGAGGGGGGCTTTCATGTTATCGAGGTAGC 296 Query 2411855 CGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTT 2411914 |||| | ||| || | ||||||| | || | ||||| || ||||| | ||||| | | Sbjct 295 CGTGGATGTCAGCCAGGAGGATCTTGACGTGGCATCCTGCGTGGAGGAGCTCGGCGATCT 236 Query 2411915 TAAAGATGGGCACAAAGTA-GCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATA 2411972 | | |||||| || ||||| || ||| |||| | ||||| | ||| || ||||| || Sbjct 235 TGATGATGGGGACGAAGTAGGCGCAGTGAGGGCGT-CCCGTTGTCGCAGTACCCCAGTA 178 >seq2884 Length=91859 Score = 98.7 bits (108), Expect = 2e-14 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || |||| || ||||| ||| | | || ||||| ||||||||| || | ||||| | Sbjct 72332 CTCCCGCAAGGACGCCAAAAGCTTGTTATTCTCGACGAGGCCGACAGCATGACGTCTGGT 72273 Query 2019255 GCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCT 2019313 ||||| || ||||| || ||| |||||||| | ||| | || || || || || | Sbjct 72272 GCCCAACAAGCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATT 72214 Query 2019314 GGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373 || ||||| ||| | | | ||||| |||| || ||||||||||||||||| Sbjct 72213 CGCATGCAATCAGTCCAACAAGATTATCGAGCCCCTGCAATCGCGTTGCGCCATCTTGCG 72154 Query 2019374 CTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGA 2019433 || ||| | || || || || || ||| ||| |||| | |||||||||| || || Sbjct 72153 CTATGCAAGGCTAACGGATGCACAAGTCGTGAAGCGCCTGCTCCAGATTATCGAGGCGGA 72094 Query 2019434 AAAGGT 2019439 ||||| Sbjct 72093 GAAGGT 72088 >seq2036 Length=12697 Score = 91.5 bits (100), Expect = 2e-12 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 653648 CCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGGCAGCGTG 653707 |||||| | ||||||||| | || || ||||||||||||||||| ||| || | | Sbjct 12089 CCCGAGCTCGGCGACAAATTCTCCTCCCGCCACGGGCAAAAGGGAGTCGTTGGACTCATC 12148 Query 653708 CGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATC 653767 | || || |||| | || | |||| | | |||| ||||||||||||| |||| Sbjct 12149 GCCCCGGCCCAGGACCTCCCCT--TCGCAGA-CACGGGCATCACGCCCGACATCATCATG 12205 Query 653768 AACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTC 653821 ||||| |||| |||| || || ||||| | ||||||||| ||||| |||| Sbjct 12206 AACCCCCACGGTTTCCCCTCCCGTATGACAGTCGGCAAGATGCTGGAGCTCCTC 12259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915914617744241