Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3051 199 6e-45 seq2657 143 4e-28 seq2884 89.7 7e-12 >seq3051 Length=56537 Score = 199 bits (220), Expect = 6e-45 Identities = 356/507 (70%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 42546 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATC 42604 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| |||| | | || || |||||| | |||||| Sbjct 42605 TCTCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCT 42664 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || || ||||| ||| |||||||| || || || || ||||||||| || Sbjct 42665 CCCATGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 42723 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | |||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 42724 CGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 42783 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | | Sbjct 42784 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 42843 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | |||| ||||||| |||||||| || | || | | | ||| ||||| Sbjct 42844 GCTCA-ACGGACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 42902 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || |||||| |||| ||||| Sbjct 42903 CGACTGGGCAGTTAGGTGGATC--CAAGATAAGGATTCTAC-CTTTGCTCAGCGTCTCGT 42959 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| || || || ||||| ||||| ||||| ||| ||| | |||| || ||||| Sbjct 42960 TGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCT 43019 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| ||||||||| | || || Sbjct 43020 CAAGAAGCGTGGCCTCATGGCTGGCCT 43046 Score = 95.1 bits (104), Expect = 2e-13 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 43164 CGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 43223 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 43224 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 43281 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 43282 TCCCTCGGTAACG-AGAAGTACTACAAGTCGACCAACCCATTCGATTTCATGGAGAACAT 43340 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769 ||| || | || ||||||||||| |||||| ||||| | ||| ||| ||| | || Sbjct 43341 CTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGG 43400 Query 1456770 CGTCA 1456774 |||| Sbjct 43401 TGTCA 43405 >seq2657 Length=10989 Score = 143 bits (158), Expect = 4e-28 Identities = 362/543 (67%), Gaps = 22/543 (4%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || ||| | | || | ||||| || | |||||||| |||| Sbjct 2530 TGGGACTGGGACTCTCTCAAGGCC-CAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCT 2472 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 ||| || | ||||||||| ||| | || || |||||||| ||| || |||| ||||| Sbjct 2471 CGTTGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGA 2412 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 | | ||| ||||||||| ||||||| || || | ||||| || || ||||| Sbjct 2411 GCCCTACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAA 2352 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 || | ||| ||||| | |||| | || || ||| | | || | |||| Sbjct 2351 CCCCTGGCTGCTCAAGGACCTGGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCG 2292 Query 263118 GCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATC 263176 |||| || | || | ||||| | ||| | | || | || |||| Sbjct 2291 CATCATCGCAG-ACGGCGGCTCCATCCAGAATATCCCCAACA------TCCCCGCCGACA 2239 Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGG 263233 ||||||| |||| ||||||||| |||||| | || | || ||||| | | |||| Sbjct 2238 TCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATGG 2182 Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293 | |||||||||| ||| |||| || |||||| |||||| | || | |||| Sbjct 2181 CCGCCGACCGCGGCGCCTTCATCGATCAATCCCAGTCCCTCAACATCCACATGAAGGACC 2122 Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || || | ||| |||| || |||||| || ||| | ||||||||||| Sbjct 2121 CAACAATGGGCAAGA---TCACATCCATGCACTTTGCTGGCTGGAAGCTCGGCCTCAAGA 2065 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | || |||||||| || |||||| | |||| || | |||| |||||||||||||||| Sbjct 2064 CCGGAATGTACTACCTCCGCACCATGGCCGCCTCCGCCCCCATCCAATTCACCGTCGATC 2005 Query 263411 AGG 263413 ||| Sbjct 2004 AGG 2002 Score = 116 bits (128), Expect = 5e-20 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| |||||| ||||| || | ||| Sbjct 3661 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGAC 3602 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| || || | ||||| Sbjct 3601 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCA 3542 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || ||||| || ||| | || ||| | || || ||| | Sbjct 3541 AAGACTGCTGGAGGTATCGGATTGAATATCCACCGTATCCGTGCCACTGGTGCATACATT 3482 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| | || |||||| |||| || ||||| ||||| || ||| |||| Sbjct 3481 GCCGGTACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACC 3422 Query 260165 GCGCGCTACGTCGACCA 260181 || | ||||| ||||| Sbjct 3421 GCAAGGTACGTTGACCA 3405 >seq2884 Length=91859 Score = 89.7 bits (98), Expect = 7e-12 Identities = 169/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| || || ||| ||||| | ||||||| ||| ||| || || || || | Sbjct 72088 ACCTTCTCCGCCTCGATAATCTGGAGCAGGCGCTTCACGACTTGTGCATCCGTTAGCCTT 72147 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 || |||||| |||||| ||||| ||||||| |||||| | | | ||| ||| Sbjct 72148 GCATAGCGCAAGATGGCGCAACGCGATTGCAGGGGCTCGATAATCTTGTTGGACTGATTG 72207 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988 || || | || || || || || | | | |||||||| |||| | ||||| || Sbjct 72208 CATGCGAATGCGAAGCGGGTGGTCGAAGAGTAGATCTCCATGGTGCGAC-GCAGGGCTTG 72266 Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048 |||||| | | ||| | || ||||||||||||||| || | | ||| ||||| || || Sbjct 72267 TTGGGCACCAGACGTCATGCTGTCGGCCTCGTCGAGAATAACAAGCTTTTGGCGTCCTTG 72326 Query 333049 CGGCAG 333054 ||| || Sbjct 72327 CGGGAG 72332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177510366717278