Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3086 105 5e-18 >seq3086 Length=87282 Score = 105 bits (116), Expect = 5e-18 Identities = 253/382 (66%), Gaps = 13/382 (3%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 || |||||||| |||| ||||||| ||| |||||||| ||||| ||| | ||| | Sbjct 9983 AACGGTCCTGAGGTCTTGAATAAATTTGTCGGTCAATCAGAAGAGAATATCCGAAACCTC 10042 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA--AAAGTTCTTTGCACATTA 19558 || ||||| || || ||||| | || | |||| | | ||| | ||||||| Sbjct 10043 TTCGCTGATGCCGAGAAAGAATACAA--GGAGAGGGGTGATGAGAGTGAGCTTCACATTA 10100 Query 19559 TAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA---------A 19609 | || | || ||| | || || | || ||||| ||||| ||||||| | Sbjct 10101 TCATTTTCGACGAACTTGATGCTGTATGCAAGCAGAGAGGCTCTGGTGGCGGAGGCGGCA 10160 Query 19610 ATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAAC 19669 ||| || |||| ||||||||| || || || | ||| | || ||||| |||| | Sbjct 10161 CTGGTGTTGGCGACAGTGTTGTCAACCAGCTGCTTGCCAAACTTGATGGTGTGGACCAGC 10220 Query 19670 TGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTAT 19729 | ||||||||| | | ||||| ||||| || || |||| | || || |||| | Sbjct 10221 TCAATAATATTATCCTGATTGGTATGACCAACCGAATGGATATGATTGATGACGCCCTGC 10280 Query 19730 TACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTG 19789 | || || || || ||||| | | || || ||| | |||||||||||| || | Sbjct 10281 TTCGTCCTGGACGTCTGGAAGTTCACATGGAGATTTCCCTACCCGATGAATCCGGCAGAC 10340 Query 19790 TGGAAATTTTAAACATACATAC 19811 ||| ||| | ||||| || || Sbjct 10341 AGGATATTCTCAACATCCACAC 10362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397440891579595