Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2657 217 2e-51 seq3051 122 1e-22 seq1736 84.2 3e-11 >seq2657 Length=10989 Score = 217 bits (240), Expect = 2e-51 Identities = 1157/1812 (64%), Gaps = 47/1812 (3%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 2046 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGATGT 2104 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| || ||| || ||| Sbjct 2105 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGA--TTGATCGATG 2162 Query 110480 AAG-CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACT 110536 ||| |||| | || | || ||||| | | || | | | | | || ||||| || Sbjct 2163 AAGGCGCCGCGGTCG-GCGGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACG 2219 Query 110537 GTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCC 110596 || ||||| |||||| || | ||||| | | ||||||||||||||| || || Sbjct 2220 GTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCGCC- 2278 Query 110597 GCCTTC-ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATT 110655 | || | | ||| | | |||||| | | |||||||||||| || | ||||| || Sbjct 2279 GTCTGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTT 2338 Query 110656 GACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTT 110715 || || |||||| | ||||| || || ||| | | | ||||||||| Sbjct 2339 GAGCAGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTT 2398 Query 110716 TGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 110775 | ||||| || || ||||| || || || | ||| || | ||||||||| || || Sbjct 2399 CGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGG 2458 Query 110776 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAAC 110835 ||| ||||| | | || ||| || | ||| | || |||||| | |||||||| Sbjct 2459 CATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 2518 Query 110836 ATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTT 110894 |||||||| | | | | || | || |||||||||| | || ||| | || | Sbjct 2519 GTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCACCCT 2577 Query 110895 GGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 110954 |||| | || || ||||| | || || || | || || | |||| || | Sbjct 2578 TGGACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACGG 2637 Query 110955 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 111014 || || | |||| || ||||| || ||||| | | || | |||||| | Sbjct 2638 AGGCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGAGGAACTTGGCCT 2697 Query 111015 CATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 111074 | ||||| || | |||| | ||| |||| || ||||| || ||||| | Sbjct 2698 CGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAA 2757 Query 111075 AACCAATAGGTCTGTGTCGCATATTA--GACTTTCGCGCAGTCTCA---ACGGGATAAAA 111129 ||| || ||||| || | || | ||| || ||| ||||| || | Sbjct 2758 CGGCAACTGGCCTGTGACGGAAGTTGCTGCGTTTGGC-----CTCCGGGACGGGGTAGTA 2812 Query 111130 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 111189 || |||||||| || | || ||| ||||| || ||||| || ||||| || Sbjct 2813 GTTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTT 2872 Query 111190 TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 111249 | | || | |||| | | | ||||| | || ||||| | |||||||| Sbjct 2873 CTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCAA 2932 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || || || || |||||| | | |||||| | ||| ||||| || | |||||| Sbjct 2933 GTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGA 2992 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 || || || || | ||||| ||||| ||||| |||||| ||||||||||| | Sbjct 2993 GCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAA 3052 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||| ||||| || | |||||| | | ||||| | || | | Sbjct 3053 CATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGC 3112 Query 111429 CTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 || | || | ||| ||| | |||||| |||||| |||||| || || || Sbjct 3113 CTTGATAGTCTTGCGA---CCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAA 3169 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATT 111545 ||| || || | || | | || || || || || || || | || | ||| | Sbjct 3170 CTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAGT 3228 Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605 || | ||| || ||||||||||| || || |||||||| || | | || | | Sbjct 3229 CGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAACAAGT 3288 Query 111606 CTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664 | | ||| || | || || | || ||||| | || || |||||||| | || | Sbjct 3289 CACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAAGACA 3347 Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTG 111720 ||||||||||||||||||| |||| |||| || || | | | ||| | |||| Sbjct 3348 TCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACCTTG 3406 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 | || || | || ||| ||| || ||||| ||||| || | ||| || | || | Sbjct 3407 GTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTT 3466 Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 111840 || || || || ||| | | |||| | | | ||||| | || || || Sbjct 3467 TCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGAT 3526 Query 111841 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 111900 ||| ||||| ||||||||| ||||| | | || || |||||||||| | || Sbjct 3527 ACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAAT 3586 Query 111901 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAG 111959 |||||||| || ||| | |||||| || | ||| || || ||||||||||| Sbjct 3587 ACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCTGTGGTGTACCAG 3645 Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGT 112017 |||||||||| ||||| | ||||| |||| || |||| ||||| || |||||| Sbjct 3646 CATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGT 3703 Query 112018 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTA 112077 ||| | ||||| || || ||||| ||||| | || || ||||| | ||||| Sbjct 3704 CTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATGTG 3763 Query 112078 CTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTT 112137 |||||| | || | ||||||| || || |||| ||| ||| ||||| || Sbjct 3764 CTGTGGCCTCTCAGCAACCTTGCCATCAAGTCGGAGAAGGTAGGATCGCTCCAGGGTCTT 3823 Query 112138 GAGACCAAAGTA 112149 || || ||||| Sbjct 3824 GAAGCCGAAGTA 3835 >seq3051 Length=56537 Score = 122 bits (134), Expect = 1e-22 Identities = 336/509 (66%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| ||||| || || || || |||||| || || | |||||| || Sbjct 43089 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 43030 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| ||| Sbjct 43029 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAGC 42970 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| || || | || |||| | ||| | | | ||| | | ||| Sbjct 42969 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 42910 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| || || || | || | |||||| | || | | || Sbjct 42909 CCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTCCG 42850 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 42849 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 42790 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| ||||| ||||| | | Sbjct 42789 CTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 42732 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 42731 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGA 42672 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCGTCAAGATCT 123144 | | ||||| | |||| ||||| ||| | |||||||||| ||| || Sbjct 42671 ACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAGGTCC 42612 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 42611 TTGGAGAGATCAATCTCCTCTGCTGTCCA 42583 >seq1736 Length=6029 Score = 84.2 bits (92), Expect = 3e-11 Identities = 183/267 (69%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743 ||||| ||||| || | ||||| || || || || | ||||| | || || || || Sbjct 1231 AAGAGCTCGCGGACGCGCTTGGCGCCGACGCCGACGTAGATCTCATCGAA-TTCGCTGCC 1289 Query 11744 GAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801 | || || || ||| ||||| || || || || | || || ||||||||||||| Sbjct 1290 GGACA-TGAAGAAGAAGGGGACGCCTGCCTCGCCGGCTACTGCGCGAGCGAGGAGGGTCT 1348 Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCC 11859 |||| ||||| || ||| |||| || | || ||||| |||| |||| || Sbjct 1349 TTCCGGTACCGGGAGGACCGACGAGGAGAACACCCTTGGGGAGCTTGCCACCGAGAGTCG 1408 Query 11860 AAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGC 11919 | ||| | || |||| | |||||| |||||||||| ||| | ||| || || || || | Sbjct 1409 AGAAT-TTTC-CGGGGTTCTTGAGGAAATCCACAAGCTCCTGAAGCTCCTCCTTCGCTTC 1466 Query 11920 GTCAATCCCCTCAACATCACTGAAGCG 11946 ||| || | ||||||| |||||| Sbjct 1467 GTCGCAGCCGTGAACATCAGAGAAGCG 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628007514602400