Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2657 246 4e-60 seq3051 188 9e-43 >seq2657 Length=10989 Score = 246 bits (272), Expect = 4e-60 Identities = 1113/1741 (64%), Gaps = 51/1741 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 2046 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTG 2105 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||||| | |||| || ||| | |||||||||||||||||| Sbjct 2106 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 2165 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 || || || || ||||| | | | | | | || | || ||||| || ||| Sbjct 2166 GCGCCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 2222 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||||||| ||| || || | ||||| | |||||| |||||||| || || | Sbjct 2223 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCGCCGTCT 2282 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 || ||| | | |||||| | | ||||||||||| || | || |||| | Sbjct 2283 GCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGC 2342 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || ||||| || ||||| || || ||| || | | ||||| || | Sbjct 2343 AGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAG 2402 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| |||||||| ||| || | ||| |||| |||||||| ||||||||| Sbjct 2403 GTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATG 2462 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 ||||| | ||| ||| ||| |||| ||| | | | | || | ||||||||| |||| Sbjct 2463 GGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCC 2522 Query 118314 CAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370 ||||| | || | || | || |||||| || | ||||| ||| | | Sbjct 2523 CAGTCCCACAGGTCGGTAGGAGTAACGCC---CCACATGTCGTATTGGAGCTCACCCTTG 2579 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAG 118427 ||| |||| |||||||| | ||||| |||| ||| | || || |||| | ||||| Sbjct 2580 GACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACGGAG 2639 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487 || | || |||| || || || || || || | | || | ||||||| Sbjct 2640 ---GCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGAGGAACTTGGCC 2696 Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547 ||| ||||| || | || ||| | ||| |||| || ||||| |||||||| Sbjct 2697 TCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCA 2756 Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAA 118604 | | ||| ||| | || | | || | || || |||| ||||| || | Sbjct 2757 ACGGCAACTGGCCTGTGACGGAAGTT---GCTGCGTTTGGCCTCCGGGACGGGGTAGTAG 2813 Query 118605 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 118664 || || || | | |||| | || ||| ||||||| ||||| || |||||||| Sbjct 2814 TTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTTC 2873 Query 118665 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 118724 | | | || | ||| | | | ||||| | || ||||| | || |||| Sbjct 2874 TGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCAAG 2933 Query 118725 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAA 118784 |||||||| | |||||| ||| |||||| | ||| || ||||||| ||| || Sbjct 2934 TTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAG 2993 Query 118785 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 118844 || ||||| || | |||||| || || ||| ||| || ||||||||||| | | Sbjct 2994 CTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAAC 3053 Query 118845 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGC 118903 ||| | || | || ||||| || || |||| |||||| | | ||| | | || | | Sbjct 3054 ATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCC 3113 Query 118904 TGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960 | | | ||| ||| | | ||||| | |||||| |||||| || || || Sbjct 3114 TTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAA 3169 Query 118961 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATT 119019 ||| || || | |||| | || || || || | ||||| | ||| | ||| | Sbjct 3170 CTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAGT 3228 Query 119020 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 119079 || || ||| || |||||||||||||| || || |||||||| || |||| | | Sbjct 3229 CGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAACAAGT 3288 Query 119080 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 119139 | || || |||| || | || || || | ||| |||| || || | || || Sbjct 3289 CACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAAGACAT 3348 Query 119140 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCT 119193 |||||||||| || || | ||| | |||| | || | | || ||| | | Sbjct 3349 CCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCACCTT 3405 Query 119194 GGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATT 119253 ||| || ||||| || ||| ||| || || || ||||| || | || || | || | Sbjct 3406 GGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGT 3465 Query 119254 GGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAA 119313 || || || || ||| | | |||| | || | |||||| | || || | Sbjct 3466 TTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGA 3525 Query 119314 TACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 119373 |||| || || ||||||||| || || | |||| || | ||||| || || | Sbjct 3526 TACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAA 3585 Query 119374 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCA 119432 | || |||| | ||| | ||||||| ||| | || |||||| ||||||||| Sbjct 3586 TACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCTGTGGTGTACCA 3644 Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTGTCGTAGG 119490 || |||||||| ||||| | ||||| |||| || |||| ||||| || ||| | Sbjct 3645 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATG 3702 Query 119491 TCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 119549 |||| | | | | ||| || || |||||||| || | || || ||||||| |||| Sbjct 3703 TCTCGATTGTCTTC-TCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATG 3761 Query 119550 T 119550 | Sbjct 3762 T 3762 >seq3051 Length=56537 Score = 188 bits (208), Expect = 9e-43 Identities = 537/813 (66%), Gaps = 17/813 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| | || ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 43388 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 43329 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 ||||| |||||||| | || || | | | || | | | | || || | Sbjct 43328 AAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGC-AGCAGCCT 43270 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||||||||| | |||| | || |||||| |||| || ||| Sbjct 43269 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 43210 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| | | ||| ||| ||||| || | || | | || Sbjct 43209 GGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGACGTCTTG 43150 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025 | || || | ||| || | | | || || |||||| ||| || || Sbjct 43149 GACGGCCTGCTTGCTTGGGCGGTGTCT-AAGGTGGGAGAAGAGGAGGCAGGCGAAGTCGG 43091 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| | Sbjct 43090 TGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGC 43031 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||||||||| | || ||||| ||||||||||| ||||| ||| Sbjct 43030 CACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAG 42971 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCA 130202 ||||| |||| |||||||| |||||||| || | |||| | |||| | | Sbjct 42970 CAGCGAAGGCAACGAGACGCTGAGCAAAGG---TAGAATCCTTATCTTGGATCCACCTAA 42914 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 ||||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | Sbjct 42913 CTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATG 42854 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 || || | | || |||||||| | || ||||| || ||||| ||| | || | Sbjct 42853 TCCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAA 42794 Query 130323 CCATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | || || ||| || || ||||||| |||| ||||| ||||| ||||| Sbjct 42793 TGTTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC- 42736 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 |||| || | | || ||||| |||||||| || ||| | || || || || Sbjct 42735 GCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGC 42676 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCGTCAAG 130497 || | || ||||| | | |||| || || ||| | |||||||||| ||| Sbjct 42675 GAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAG 42616 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||| |||||||| | |||||| || ||||| Sbjct 42615 GTCCTTGGAGAGATCAATCTCCTCTGCTGTCCA 42583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618411088757640