Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2657 244 1e-59 seq3051 140 4e-28 >seq2657 Length=10989 Score = 244 bits (270), Expect = 1e-59 Identities = 906/1394 (65%), Gaps = 33/1394 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| || || | || ||||| || || || ||||| Sbjct 3769 CCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGTGAGGATATTGAGAAGACA 3710 Query 104282 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||||||| || ||||| |||| || |||| ||||| | ||||| |||| Sbjct 3709 ATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCCAACACTCT 3652 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||||||| |||| | || |||||| | ||| || ||||||| Sbjct 3651 TCAATGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGACATGAAGGAGG 3592 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || | |||||||||| || || | | ||||| ||||||||| |||| Sbjct 3591 ATAGTATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTG 3532 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || || | ||||| | | | |||| | | ||| || || | Sbjct 3531 GAGGTATCGGATTGAATATCCACCGTATCCGTGCCACTGGTGCATACATTGCCGGTACCA 3472 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || | || | || ||| | || ||||| ||||| || ||| ||| || | || | Sbjct 3471 ACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACG 3412 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | | |||| ||| | | | | || || |||| |||| |||||||||||||| Sbjct 3411 TTGACCAAGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCAC 3353 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 |||||| || | |||||||| || ||| | ||||| || | ||||| | || | Sbjct 3352 GCGGATGTCTTTGAGTTCCTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGTGCC 3293 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || || | |||| |||||||||||||| ||||||||||||||| | || ||| ||| Sbjct 3292 CGTGACTTGTTCTATGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAAC 3233 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| | ||| | || || || || || ||||| | | |||| || || Sbjct 3232 GGCGACTGGACCCTCATGTGCCCCAACGAATGC-CCTGGATTGGCAGATGTTTACGGCGA 3174 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTG 104872 ||||| || || || ||| |||||| | || ||| || | | || ||| | Sbjct 3173 TGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGG-GTC-GCAAGACTAT- 3117 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | | ||| | | |||||| ||||||| || ||||| || | || | Sbjct 3116 CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTT 3057 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||| | ||||| || ||||| |||| ||||| || || ||||| | ||| ||| Sbjct 3056 CATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCG 2997 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| || || ||||| || | || | | | | ||||||| || ||||| Sbjct 2996 CAGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTTGCCGTGTG 2937 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGAT 105109 |||| | ||||| | || || || | ||||| || || | ||| | |||| || Sbjct 2936 TAACTTGGCATCCCTTGCCCTGCCGACATATGTTGA--CATGGCCAACGGCACATACGAC 2879 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || || ||||| || || | ||| ||| ||| | || | | ||||| Sbjct 2878 TTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAATAAGATCATTGAC 2819 Query 105170 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || | |||||||| ||| | || | || | | ||| | ||| || Sbjct 2818 GTCAACTACTACCCCGTCCCGGAGGCCAAACGCA---GCAACTTCCGTCACAGGCCAGTT 2762 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 | | ||||| |||||||| || |||| |||| | | |||| | || ||||| Sbjct 2761 GCCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCT 2702 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA- 105345 ||| || ||| |||| | | || || |||||||| || |||| ||| |||| Sbjct 2701 CCCGAGGCCAAGTTCCTCAACTCCCAGATCTTCGAGACCATCTACCACGGTGCT-TTGAC 2643 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || ||| |||| || || | || |||| || || | ||||| || |||| Sbjct 2642 TGCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACTTACGAGGGATCCCCAGT 2583 Query 105406 TTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGAC 105463 || |||||| | ||| |||| || ||||||| || | || | | | | ||| Sbjct 2582 GTC-CAAGGGTGAGCTCCAATACGACATGTGGG-GCGTTACTCCTACCGACCTGTGGGAC 2525 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| ||||||||| | |||||| || | ||| | || ||| || ||| | || Sbjct 2524 TGGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTTGCA 2465 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| || ||||||||| | || ||| | || || || ||||| || |||||| Sbjct 2464 CCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCCTAC 2405 Query 105584 ACGACGAACATCTA 105597 || |||||||||| Sbjct 2404 ACCTCGAACATCTA 2391 >seq3051 Length=56537 Score = 140 bits (154), Expect = 4e-28 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || || | ||||| || || ||||| | | | Sbjct 42859 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGG 42918 Query 94774 TGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | |||| | || | |||||||| |||| ||| | || || || |||| Sbjct 42919 TGGATCCAAGATAAGGATTC---TACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTT 42975 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||||||||||||||| || |||||| | | |||| |||||||||||||| || ||| Sbjct 42976 GAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTC 43035 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| | || || |||||| |||||||| ||||| ||||| ||||| |||||| Sbjct 43036 ATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGGTCTCCAC 43089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583238060119560