Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 185 3e-41
seq3080 113 1e-19
>seq2289
Length=32595
Score = 185 bits (204), Expect = 3e-41
Identities = 182/235 (77%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| | ||| || || ||||| |||||||| || |
Sbjct 1410 TTTGCATACCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGT 1469
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || ||||||||||| || || ||||| |
Sbjct 1470 AGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGT 1529
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||||||||| || || |||||||| || | || || |||||||| | ||||||||
Sbjct 1530 CCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATG 1589
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| |||| |||||||| || || || || ||||||||||||||
Sbjct 1590 ATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 141 bits (156), Expect = 3e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||||||||| || |||||||| || || || || || ||
Sbjct 1186 CATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTC 1245
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 1246 AGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 1305
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || ||||| || || |||| || || ||||| || | ||| || | ||
Sbjct 1306 TGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTC 1365
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || |||| |||||||||||| || || || || || || |||||
Sbjct 1366 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 93.3 bits (102), Expect = 1e-13
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 140579 CCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTC 140638
|||||| || || || || || || || || || || ||||| || || || || || ||
Sbjct 1030 CCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTC 1089
Query 140639 TTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGT 140698
||||||||||| || | || || || ||||| | || || | ||||| || || ||
Sbjct 1090 CTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGT 1149
Query 140699 AACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||||||||| | || || || |||||||||||
Sbjct 1150 AATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || | || || || ||||| || || || || || ||
Sbjct 1870 CATACCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 1929
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| || || || ||||| ||||||||||| || ||
Sbjct 1930 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 1989
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||| || || || || || || ||| || || || || || | ||| || | |
Sbjct 1990 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAACGTTGTCGATGGTATCGGACGACT 2048
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || ||||| || | ||||| || ||
Sbjct 2049 CGACCTCAAGGGTGATGGTCTTGCCAGT 2076
>seq3080
Length=59079
Score = 113 bits (124), Expect = 1e-19
Identities = 217/320 (68%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186
||||| ||||| || |||||||||||| | | | | ||| || || || ||||
Sbjct 51464 CCATCCTCTCCGTAGATGAATTGAACAATGTCACCAAGAGAGTTCCTGACGGTTCCATCA 51523
Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246
|| | ||||| | |||||| || || || | || || || ||| ||||||||||
Sbjct 51524 TACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGTTGAATGTAACCAGTTTCG 51583
Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306
||| || || || |||||||| | ||| |||||||| |||| || |||||||| ||
Sbjct 51584 GCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAAC 51643
Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366
|||| ||||| || || | | | || |||||| ||| || | | | || ||
Sbjct 51644 TCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTCGGGAGAG 51703
Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426
| ||||| ||||| |||| || | || || | || || || | ||||| || ||
Sbjct 51704 TAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAATCCGAAAGGAATACGCTTA 51763
Query 378427 CCATCAACATTCTGTTGACC 378446
|| |||||| ||| || ||
Sbjct 51764 CCCTCAACAGACTGCTGTCC 51783
Score = 87.8 bits (96), Expect = 5e-12
Identities = 102/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| |||| || ||| ||||| | ||||| ||||| |||||||||||
Sbjct 50774 CGCGGCACACCAAGTGTGACGTTC---TTAGACGACACACCGGCAAAATGGAAAGTATTG 50830
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||| || || || || |||| || || ||||| ||
Sbjct 50831 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 50890
Query 377578 CCAGGATTGACAATAGC 377594
|| || ||||| | |||
Sbjct 50891 CCGGGGTTGACCAGAGC 50907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515193847119557
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