Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2657 210 2e-49 >seq2657 Length=10989 Score = 210 bits (232), Expect = 2e-49 Identities = 478/715 (67%), Gaps = 28/715 (4%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 3706 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 3649 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| | ||| ||||||| |||| | |||||||| || Sbjct 3648 ATGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATA 3589 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || || |||||| |||||| ||||| ||| | || | Sbjct 3588 GTATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAG 3529 Query 53421 GTATCGG------TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474 ||||||| ||||||| || | ||||||| | || || || || | Sbjct 3528 GTATCGGATTGAATATCCAC----CGTA--TCCGTGCCACTGGTGCATACATTGCCGGTA 3475 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 | ||||| | | | || || || |||||||||||||| ||||||||||| || ||| Sbjct 3474 CCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGT 3415 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 |||| |||| ||||| |||||| || | |||||||||||| | ||||| |||| Sbjct 3414 ACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGC 3355 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 |||| || | | ||||| || || || | ||| || || | || || | || Sbjct 3354 ACGCGGATGTCTTTGAGTTCCTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGTG 3295 Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGG 53714 ||||||| |||| ||||| ||||||||||| ||||||||| | || |||||| Sbjct 3294 CCCGTGACTTGTTCTATGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGA 3235 Query 53715 ACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTG 53774 ||| || ||| ||| |||||||| ||||| ||||| || | | ||| ||||| | Sbjct 3234 ACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGCG 3175 Query 53775 AGGAGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCGCTACAAGAAGA 53828 | ||||| | | | | || || | | | | | | |||| ||| |||| Sbjct 3174 ATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC------AAGA 3121 Query 53829 AGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGC 53888 ||||||| | || | ||| | | || ||| || ||| ||||| |||| | Sbjct 3120 CTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACC 3061 Query 53889 CGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 | | ||||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 3060 CTTTCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 3006 Score = 109 bits (120), Expect = 6e-19 Identities = 299/449 (67%), Gaps = 13/449 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | |||||| | ||| | Sbjct 2485 CGCAACTCCCTGCTCGTTGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTC 2426 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||||||| |||||| ||| || || ||| Sbjct 2425 AACGAGTGCTTCGAGCCCTACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGGCGAG 2366 Query 55604 TTTGTCATGATCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660 || || | || ||| | | || ||||||||||| | || ||| | Sbjct 2365 TT--CCAAG-TCGTCAACCCCTGGCTGCTCAAGGACCTGGTCGACATGGGTCTCTGGTCC 2309 Query 55661 CCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGAT 55716 | || |||| || || | || | |||| || ||| |||||| ||| | Sbjct 2308 GACAACATGAAGAACCGCATCAT-CGCAG-ACGGCGGCTCCATCCAGAATATCCCCAACA 2251 Query 55717 TCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775 ||| | || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 2250 TCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATCG 2191 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | | ||| || || || || || | |||||| || |||||||| || |||||| || Sbjct 2190 TCCAGATGGCCGCCGACCGCGGCGCCTTCATCGATCAATCCCAGTCCCTCAACATCCACA 2131 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 || || | || || ||| |||| | | || ||||||||| || |||||| || | Sbjct 2130 TGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTCGGCC 2071 Query 55896 TCAAGACGGGTATGTACTATCTGCGGACC 55924 ||||||| || |||||||| || || ||| Sbjct 2070 TCAAGACCGGAATGTACTACCTCCGCACC 2042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547194665416200