Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1955 84.2 2e-11 >seq1955 Length=10280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| || || |||| ||||| || || ||||| | |||||| || Sbjct 2029 GACGTAGAACTGCGCGAACATGTGACACGGCGGCAGAGCCATGATCTTCAGATCCGCGGG 2088 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 |||||| || | || | || | | ||||| || | | || ||| ||||| Sbjct 2089 GTTCCATGCACTCAGGATAATTCGGCGGTCATACGGCGTATGGCGCAGCTTGTGAATCAC 2148 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | |||||| || | |||||||||| ||||||| || || || || |||| | Sbjct 2149 CTCCGCCAGCTGATCAACACCCTGTCCCGTGTAGTCCGTCTGGGCGTCCACG-TACTTGG 2207 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 |||||||||| | ||||||||| |||||||| ||||| | || |||||| Sbjct 2208 CCCCAAAGTGCCGCCACTGGAATCCGTAGACAGGGCCGAGATCACCCTCC 2257 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34390 GGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCG 34449 |||||| || | ||||| |||||||| ||||||||| | ||||||||||| |||| || Sbjct 2257 GGAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTA-CG 2199 Query 34450 GGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACA 34508 || || || ||||||| |||||||||| | || |||||| | | ||||| ||| Sbjct 2198 TGGACGCCCAGACGGACTACACGGGACAGGGTGTTGATCAGCTGGCGGAGGTGATTCACA 2139 Query 34509 CCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATC 34568 || | | || ||||| | | || | || | || |||||||| ||||| Sbjct 2138 AGCTGCGCCATACGCCGTATGACCGCCGAATTATCCTGAGTGCATGGAACCCCGCGGATC 2079 Query 34569 TCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 | | ||||| || || ||||| |||| || || ||||||||| Sbjct 2078 TGAAGATCATGGCTCTGCCGCCGTGTCACATGTTCGCGCAGTTCTACGTC 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448244923369680