Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2358 190 5e-43
seq2289 176 1e-38
seq2629 129 1e-24
seq2657 111 4e-19
>seq2358
Length=47611
Score = 190 bits (210), Expect = 5e-43
Identities = 177/225 (79%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||||||||| ||||| | |||||| |||||||| || |||||||| ||||||| |||
Sbjct 17968 TCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 18027
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||| || ||||||||||| |||||||| ||||| || ||||| || ||||
Sbjct 18028 GGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 18087
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || || || ||||| || || || || |||||
Sbjct 18088 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTC 18147
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| ||||| || ||||| || || | |||||
Sbjct 18148 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
>seq2289
Length=32595
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || || || ||||| ||||| ||||| || |||| || ||
Sbjct 1423 ACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGT 1482
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| ||||||||||| || || ||||| ||||| || ||||| ||||||| |||
Sbjct 1483 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCC 1542
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || ||||| || ||||| ||||| ||| ||||| ||
Sbjct 1543 CTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAG 1602
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||||||||| |||||||| ||||| | ||||||
Sbjct 1603 CGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 174 bits (192), Expect = 4e-38
Identities = 171/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| | ||||||||| ||||| || || ||||| || || | || ||
Sbjct 1652 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 1711
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || ||||||||||| ||||| || ||||| || ||||| ||||||| ||
Sbjct 1712 CGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 1771
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| ||||| || ||||||||||| || |||||||| | |
Sbjct 1772 TCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAA 1831
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| |||||||| ||||| || || | ||||||
Sbjct 1832 GTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| ||| ||| || |||||||| || || || ||
Sbjct 967 ACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 1026
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || ||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 1027 CCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACC 1086
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| || ||||| || |||||||| || |||||||||||
Sbjct 1087 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAG 1146
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| || | ||||| || || | ||||||
Sbjct 1147 AGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || || ||||| || |||||||| || || | ||||| | |||||
Sbjct 1205 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 1264
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || ||||| || || | || ||||| ||
Sbjct 1265 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1324
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || || || || || || || |||
Sbjct 1325 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 1384
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | |||||
Sbjct 1385 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
>seq2629
Length=50867
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||| || | |||||| || ||||||||||| || |||||
Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| ||| |||||||| |||||||| || || || |||
Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 38126
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || ||| || ||||| || ||||| ||||| ||||| | ||||| || ||
Sbjct 38127 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 38185
>seq2657
Length=10989
Score = 111 bits (122), Expect = 4e-19
Identities = 191/276 (69%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | |||| |||||| |||||| ||||| || ||||
Sbjct 3011 GTTCTTCTGGTTGCTCTTGCGGTTGCA---GGCATCCTTGTACAACATGAAAGGGTTTCC 3067
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| |||| | |||||||| | |||||||| |||||| || ||||||
Sbjct 3068 TGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCG 3127
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| || || || |||||||| | ||||||| ||||||| || || || |||||
Sbjct 3128 ACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACATC 3187
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || || || |||||||| | ||| |||| | |||| | || || ||
Sbjct 3188 TGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACG 3247
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | |||||| ||||||||
Sbjct 3248 CTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAA 3283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159105677750435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |