Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2358 107 2e-18
seq2289 89.7 4e-13
>seq2358
Length=47611
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| ||| || || || || ||||| | ||| || || | || ||
Sbjct 17984 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 18043
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| |
Sbjct 18044 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18103
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || |||| | | | |||||| ||||||||| || | |||||| | ||
Sbjct 18104 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18163
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||||||| || || || |||||||||||
Sbjct 18164 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
>seq2289
Length=32595
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || ||| || || || || || |||| || || || |||| ||
Sbjct 1664 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 1723
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| |||||||| || || || ||||||||||| | || | || ||| |||||| |
Sbjct 1724 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1783
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| ||| || | | | | || ||| |||||| || |||| ||||| | ||
Sbjct 1784 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 1843
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| || || || || ||||| |||||
Sbjct 1844 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||||||||| ||| || || || || || || | || || || | || || |||||
Sbjct 1213 ATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTG 1272
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTT 39199
|||||||| || || || |||||||||| ||||||| | || ||| || || ||| |
Sbjct 1273 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTTGGATCT 1331
Query 39200 TCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| |||| | | | ||||| |||||| || |||| ||| || | ||||| |
Sbjct 1332 TAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGG 1391
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || |||||||||||
Sbjct 1392 TGAGAGTCTTGACGAAGATTTGCAT 1416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429529271763647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |