Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 89.7 3e-13
>seq2289
Length=32595
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || |||||| | || ||||| || |
Sbjct 1872 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 1813
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 1812 GACACCATCGACAATGTGAAGTC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1754
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || || ||||| || || || |||| |||||| | ||| |||||
Sbjct 1753 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAA 1694
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 1693 CATTCAGAAGGAGTCGAC 1676
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || || |||||||| ||||| || || || || || || |
Sbjct 1644 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCT 1585
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || || ||| ||||| || || | || || || ||
Sbjct 1584 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAG 1525
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| || || || ||||| || | |||||| | || ||||||
Sbjct 1524 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1465
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| ||||| ||||| || | ||||| |||
Sbjct 1464 ATTCAAAAGGAGTCGACCCTGCATTTGGTT 1435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337996751304452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |