Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2657 161 1e-34 >seq2657 Length=10989 Score = 161 bits (178), Expect = 1e-34 Identities = 408/617 (66%), Gaps = 10/617 (2%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || ||||||| |||||||||||||||| || |||||||| | | | Sbjct 3165 TCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 3224 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| || | | || || || ||||| |||||||| || ||||| |||||| || Sbjct 3225 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAAC 3284 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | || |||| | ||| || || || ||||| | | || || ||||| | Sbjct 3285 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAAG 3344 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | |||||||| || | || || || | | | ||||| || || || || || Sbjct 3345 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCT 3404 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | || || |||||||| || | || | | ||| || | ||| ||||| || Sbjct 3405 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 3464 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT---- 78280 |||| || || || | ||| || ||| | || || ||| ||||||| Sbjct 3465 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATA----CGGTGGATATTCAA 3520 Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340 || || ||||| || |||| || || | || ||| || | ||| || |||||||| Sbjct 3521 TCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACC 3580 Query 78341 CTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 78400 ||| ||||| || ||| |||||| | | || ||| || | || || || Sbjct 3581 CTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGT 3640 Query 78401 TCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTA 78460 || ||||| || | ||| || || || || || || |||| ||| | || ||||| Sbjct 3641 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 3700 Query 78461 TGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACA 78519 ||| || || | || || ||| || | ||||| || ||||| |||||||| | || Sbjct 3701 TGTCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCA 3759 Query 78520 TATGCTGAGGTCTTTCA 78536 | ||||| || || ||| Sbjct 3760 TGTGCTGTGGCCTCTCA 3776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694641716600160