Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2289 174 1e-38 seq2358 156 4e-33 seq2629 118 1e-21 >seq2289 Length=32595 Score = 174 bits (192), Expect = 1e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || || ||||||||||||||| ||||||||| Sbjct 1646 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 1705 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| ||||| ||||||||||| ||||||| ||| Sbjct 1706 AGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1765 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| || | | | |||||| |||||| || Sbjct 1766 ATGCCCTCCTTGTCCTGGATCTTCGACTTC-ACATTGTCGATGGTGTCGGACGACTCAAC 1824 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || ||||| || ||||| ||||| |||||||| Sbjct 1825 CTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| || ||||||||||||||||| ||||| |||||| Sbjct 961 GCCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1020 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || | | | || |||||||||||||| ||||| ||||||||||| ||||||| || Sbjct 1021 CAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGG 1080 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||| ||| ||| | || | | ||| | | | ||||| ||||| | Sbjct 1081 GATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAA 1139 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || |||| ||||| |||||||||||||| Sbjct 1140 CCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188 Score = 131 bits (144), Expect = 2e-25 Identities = 171/232 (74%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||||| || |||||| |||||||| ||||| || Sbjct 1418 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 1477 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || || || ||||||||||| ||||||| ||| Sbjct 1478 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1537 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CA---GTGTCGCTCGACT 41810 | | |||||||||| ||| | || | ||| |||| | || || || || | Sbjct 1538 ATTCCCTCCTTGTCC-TGAATCTTCGACTT----GACGTTATCAATGGTATCAGATGATT 1592 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | ||| ||||| || ||||| || ||||| || ||||||||||| Sbjct 1593 CCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644 Score = 125 bits (138), Expect = 7e-24 Identities = 168/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||| || Sbjct 1190 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1249 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| ||||| ||||||||||| ||||||| || Sbjct 1250 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1309 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || |||||| || ||| || ||| | | | ||| | || || ||||| Sbjct 1310 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATG-----GTATCCGACGACT 1364 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||| || || || || || || ||||| ||||| || ||||| Sbjct 1365 CGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || || ||||||||| ||||| ||||||||| Sbjct 1874 CCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1933 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || || |||||||||||||| ||||| || || ||||||| |||| Sbjct 1934 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 1993 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| |||| | | | || ||| |||||| || Sbjct 1994 ATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGTTGTCGATGGTATCGGACGACTCGAC 2052 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 2053 CTCAAGGGTGATGGTCTTGCCAGTCA 2078 >seq2358 Length=47611 Score = 156 bits (172), Expect = 4e-33 Identities = 163/212 (77%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| || || || |||||||| | || ||| Sbjct 17984 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 18043 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| | Sbjct 18044 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18103 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | || | ||| ||| |||||||||||| | || || || | Sbjct 18104 ATCTTGGACTTGACATTGTCG--ATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCT 18161 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||||||| ||||| ||||| || |||||| Sbjct 18162 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 18193 >seq2629 Length=50867 Score = 118 bits (130), Expect = 1e-21 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || ||||| | || |||||||||||||| || || | Sbjct 38005 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 38064 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||||| ||||| | ||||||||| ||| || ||| || | Sbjct 38065 TCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 38124 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||| ||| ||||| ||||| | || || || || ||||||| ||||| || Sbjct 38125 CG--ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 38182 Query 41851 GAA 41853 ||| Sbjct 38183 GAA 38185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462285975922800