Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq98 96.9 7e-15 seq91 87.8 4e-12 >seq98 Length=123527 Score = 96.9 bits (106), Expect = 7e-15 Identities = 174/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 ||||||| || || || | ||| |||||||| | ||| || |||| ||| | Sbjct 97972 TCATTACCGAGGCCGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 97913 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 | | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | | Sbjct 97912 TGCTCGGCATGAACGCC-AACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 97854 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | | || ||| ||||||| ||||| || | ||||| || | || |||||| Sbjct 97853 CTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAG 97794 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || | ||| ||||||||||||||||| ||||| ||| ||||| || | | Sbjct 97793 AACATCTCCTTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAG 97734 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 97733 ACTGGTGTCATG 97722 >seq91 Length=135597 Score = 87.8 bits (96), Expect = 4e-12 Identities = 203/306 (66%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 319364 CGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTC 319423 ||| ||||| |||||| ||| | ||||| || ||| ||||| || | || || | Sbjct 89845 CGGAAAGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAAATCCGCCAAGTTAC 89786 Query 319424 CCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGT 319483 ||||||| ||||| || ||||| ||| ||| ||||| || | | Sbjct 89785 CCTTGTAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCAGTGCAGACTTCAT 89726 Query 319484 CGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGT 319543 ||||||| ||||||||||| || || || | | | | | || | || | |||||| Sbjct 89725 CGAGGAAGCCGGAGTCGTGAGAAACGATTAGGGAGGTGATCTCGGTGTGGGTCTTCAGGT 89666 Query 319544 ATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCA 319603 | || | |||| | ||||| | ||| | || ||||| || ||||| ||||| | Sbjct 89665 AATCCTGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGA 89606 Query 319604 GTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGG 319663 | | | || |||| | ||| || | ||||||||||| ||||| ||||| || |||| Sbjct 89605 GAACATCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGG 89546 Query 319664 AAAGAG 319669 | |||| Sbjct 89545 ACAGAG 89540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816261025730