Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq98 354 8e-93 seq65 120 3e-22 seq70 118 1e-21 seq100 102 8e-17 >seq98 Length=123527 Score = 354 bits (392), Expect = 8e-93 Identities = 570/812 (70%), Gaps = 23/812 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || ||||| |||||||| | |||||| | || || Sbjct 98582 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 98523 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | || ||| | |||||| | |||||| Sbjct 98522 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 98463 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| ||||| || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 98462 CACGTTCTGGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 98403 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| ||| | | || || || ||||||||||| || || ||| || Sbjct 98402 TTCAG-CAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 98344 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | ||| | || | || || |||||||||||| ||| | ||| Sbjct 98343 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAA------GGA 98290 Query 116932 GGAGAAGCTC------CGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 | || |||| | | | || || ||||| ||||| || || ||| |||| || Sbjct 98289 GCAG--GCTCAACGCACATACCTCTTCAATGCCATTGAGACCATTCCTTGCATCAAGAAG 98232 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | | || || |||||| |||| || Sbjct 98231 AAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCCACCTTCGCTCAGCGTCTC 98172 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || |||||||| ||||| ||||| ||||||| || ||| |||||| |||| || ||| Sbjct 98171 GTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATTTTCTGG 98112 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 ||||||||||| ||||||||| | |||||||| || |||||||||||||||| | ||| Sbjct 98111 CTCAAGAAACGTGGCCTCATGGCTGGCCTGACCTTTTCCAACGAGCTCATCTCCCGTGAC 98052 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || ||||| ||||| | || ||| || | || || || ||| Sbjct 98051 GAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTCAGACACCGCCCAAGC 97992 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | ||| || || | ||||| || ||| |||||||||| ||| | || Sbjct 97991 AAGAAGGCCGTTCAAGACGTCATTACCGAGGCCGTCAGCATCGAGCAGGAGTTCTTGACT 97932 Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || | | || ||||| ||||| || | || | | |||| ||||||||| || Sbjct 97931 GAGGCACTTCCCTGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 97873 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||||||||||||||||||| || | || ||| ||||||| || |||| Sbjct 97872 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 97813 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||| ||| | ||||||||||| Sbjct 97812 CCCATTCGACTTCATGGAGAACATCTCCTTGG 97781 >seq65 Length=170753 Score = 120 bits (132), Expect = 3e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || |||||| | | || | | | | |||| | ||| Sbjct 103062 ACTGGCAAGACCATCACCCTTGAGGTCGAATCGTCTGATACCATCGACAACGTT-AAGAG 103120 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| || ||| ||||||||||||| || |||| ||| ||||| Sbjct 103121 CAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 103180 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| ||||||||| |||||||||||||||||||||| | || || || Sbjct 103181 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 103240 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || || || | || ||||| | | Sbjct 103722 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 103781 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | || || ||||||||||| ||||||| Sbjct 103782 GATACCATCGATAACG-TCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 103840 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | |||||||| || ||||| Sbjct 103841 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAA 103900 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||| | ||||| || Sbjct 103901 CATCCAGAAGGAGTCCACGTTACATCTTGT 103930 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| || || || | || || ||| | || Sbjct 103494 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 103553 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| ||||| || || ||||||| Sbjct 103554 GATACCATTGATAACG-TCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCA 103612 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || |||||||| || | |||||||| |||||||| Sbjct 103613 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAA 103672 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || |||||||| || Sbjct 103673 CATTCAGAAGGAGTCGACCCTGCATCTGGT 103702 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| || |||| || || | | Sbjct 103950 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 104009 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| ||||||| Sbjct 104010 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 104068 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || ||||| |||||||| || | | | || || | ||||||||| Sbjct 104069 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTGGAGGATGGGAGGACGCTGAGCGACTACAA 104128 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| ||| || || Sbjct 104129 CATCCAGAAGGAGAGCACTCTTCA 104152 >seq70 Length=162585 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 32229 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 32170 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 32169 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 32110 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 32109 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 32050 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 32049 ATCCAGAAGGAGTCCACTCTTCA 32027 >seq100 Length=120018 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || ||||| || |||| | | Sbjct 34660 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 34601 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || || |||||||||| || || Sbjct 34600 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 34541 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 34540 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 34481 Query 40879 G 40879 | Sbjct 34480 G 34480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215522622960