Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq65 116 3e-21 seq70 113 4e-20 seq100 89.7 4e-13 >seq65 Length=170753 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || || ||||| |||||| ||||| || ||| Sbjct 103690 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCA 103631 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || |||||||| || ||||| || |||||||||||| ||| || || Sbjct 103630 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTTCGACTTG 103571 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || | ||| || | || | || ||||| | || | ||| ||||| || ||||| Sbjct 103570 ACGTTATCAATGGTATCGGATGAT-TCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGT 103512 Query 118721 TTTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 103511 CTTGACAAAAATCTGCAT 103494 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||| || || |||||||| ||||||| || | | |||||| Sbjct 104159 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 104100 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || ||||| |||| | ||||||||| || || || || |||||||| || Sbjct 104099 CAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 104040 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | |||||||| ||| ||||||| || | || || Sbjct 104039 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTT 103980 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || || ||||||||||| Sbjct 103979 TCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || ||||| ||||| ||| || |||||| ||||| Sbjct 103474 ACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCCTCA 103415 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || || |||||||| || ||||| |||||||||||||| Sbjct 103414 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 103355 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||| ||||| | || | || ||| Sbjct 103354 ATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 103295 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 103294 CCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| || ||||| |||||||||||| || || Sbjct 103918 GTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCC 103859 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || || || ||||||||||| ||| || || || Sbjct 103858 GCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTGGACTTG 103799 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| |||| |||||| || | || | || || ||||| ||||| Sbjct 103798 ACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTC 103739 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 103738 TTGACGAAGATTTGCAT 103722 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| ||| | ||||| ||||| Sbjct 103246 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 103187 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| ||||| ||||| || || || || |||||||||||| Sbjct 103186 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 103127 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| ||| || | |||||||| | ||| | || ||| Sbjct 103126 ATCTTGCTCTTAACGTTGTCGATGGTATCAGACGATTCGACCTCAAGGGTGATGGTCTTG 103067 Query 118710 CCGGTCA 118716 || |||| Sbjct 103066 CCAGTCA 103060 >seq70 Length=162585 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | ||||| |||||||| | || ||||| || || ||||||||||| Sbjct 32002 ACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 32061 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| |||||||||||| || || ||| |||| || |||||||| || || || Sbjct 32062 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 32121 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || ||||||||||| || || || || | |||| || || | ||| || Sbjct 32122 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 32181 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| | ||| | || ||||| ||||| || || || || || |||||| || Sbjct 32182 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 32233 >seq100 Length=120018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| |||||||||||| || ||||| |||| Sbjct 34482 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 34541 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || ||||| || ||||||||||| || || || || | ||| Sbjct 34542 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 34601 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | || || | | ||||||||| | ||| | || ||||| |||| || || || || Sbjct 34602 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 34660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827380947132