Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq65 116 4e-21
seq70 107 2e-18
>seq65
Length=170753
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||||||||| || | |||||| || |||| || |||||||| || |||||
Sbjct 103457 CTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 103398
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 103397 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 103338
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| ||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 103337 GTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 103278
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 103277 GAAGATCTGCAT 103266
Score = 105 bits (116), Expect = 8e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| ||||| || |||||| ||||| ||||| || | ||| || || | || ||
Sbjct 103702 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 103643
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||||||||| || || || ||||||||||| | || | | |||||||| | ||
Sbjct 103642 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CTTG 103584
Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| | || | |||| | | | || ||| |||||||| || | ||| || || ||
Sbjct 103583 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 103524
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || ||||| ||||| || |||||
Sbjct 103523 GCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494
Score = 93.3 bits (102), Expect = 5e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
||| || ||| |||||| || || |||||||||| ||| || || | || || |||||
Sbjct 103925 ATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 103866
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
||| || ||||| || || ||||||||||| | || | || |||||| || ||| ||
Sbjct 103865 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 103806
Query 43100 TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
|||| | | | || || ||| || || || | ||| || || || || ||
Sbjct 103805 GGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGT 103746
Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || |||||||||||
Sbjct 103745 GAGAGTCTTGACGAAGATTTGCAT 103722
Score = 93.3 bits (102), Expect = 5e-14
Identities = 166/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008
||||||| || || | | ||| | |||||| || | ||||||||||| || || ||||
Sbjct 104184 CCTATTGGCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGT 104125
Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068
| || ||| |||| | | || || |||||||| ||||| || || | ||||||||||
Sbjct 104124 AGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGT 104065
Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCT 43126
| | || | | |||||| ||| ||| | || | |||| ||| | | | |||||
Sbjct 104064 CCGGTGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGA 104007
Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || |||| || ||||| || || || | ||||| || || || |||||
Sbjct 104006 AGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950
>seq70
Length=162585
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| || || |||||||| | || || || | || ||
Sbjct 32021 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 32080
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 32081 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 32140
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
|| || |||| | | | || ||| ||| ||||| || | ||||| || |||
Sbjct 32141 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 32200
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || ||||| || |||||||||||
Sbjct 32201 CCCGTCAGGGTCTTCACGAAGATTTGCAT 32229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571813518651880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |