Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq39 96.9 7e-15
seq181 89.7 1e-12
>seq39
Length=231448
Score = 96.9 bits (106), Expect = 7e-15
Identities = 412/643 (64%), Gaps = 25/643 (4%)
Strand=Plus/Minus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| | ||| | | ||| | ||||| || || ||| ||| || || ||| ||
Sbjct 102831 GATTTCAACTACCAATACTTCGGCTTCAAGACTCTTGAGCGATCCTACCTTCTCCGCCTT 102772
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
||||||||| ||| || | ||||||||| | ||||| || || || || ||||||
Sbjct 102771 GATGGCAAGGTCGCTGAGAGGCCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCAC 102712
Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTG---AACGCTGGATG 248985
|| || || |||| ||||||| |||| | ||| | || || |
Sbjct 102711 GGCGAGGATATTGAGAAGACAATCGAGACATACAACCTCATGTCTTCCAAATACT---TC 102655
Query 248986 ACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATC--AGCTGAGCTCGT 249043
||||| || | || || |||||||| || ||||| | ||| | ||||| || |
Sbjct 102654 ACACACGCTTCCCCAACACTCTTCAATGCTGGTACA--CCACAGGCCCAGCTGTCGTCCT 102597
Query 249044 GCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGA 249103
|||| | | | |||| | || || | | || || || |||||||| || || | |
Sbjct 102596 GCTTCTTGGTCGACATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAG-ACA 102538
Query 249104 CG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAAC--ATCCGAG 249160
| || | ||| || || || || || ||||| | | || || | ||||| |
Sbjct 102537 TGTGCCATGATCTCAAAGACTGCCGGAGGTATCGGATTGAACATC--CATCGTATCCGTG 102480
Query 249161 CGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTC 249220
| | ||| | |||||| ||||| || || | | |||||||| ||| | || |
Sbjct 102479 CCACTGGTGCATACATCGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCC 102420
Query 249221 GATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGT 249274
| ||| | |||||| |||| | | |||| | || ||||| ||
Sbjct 102419 GCGTGTTTAACAACACCGCGAGGTACGTTGACCAAGGTGGCAACAAGCGCCCC---GGTG 102363
Query 249275 CGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAA 249334
| |||||||| || | || |||||||| ||| | || |||||||||||| ||| ||
Sbjct 102362 CTTTCGCCATCTACGTCGAGCCATGGCACGCGGATGTCTTCGAGTTCCTGGACCTGAGAA 102303
Query 249335 AGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCG 249394
||||| ||||||| ||| | | || |||||| | ||||||| || ||| || | |
Sbjct 102302 AGAACCACGGCAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGG 102243
Query 249395 ACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| | |||||| || ||| || ||||||| ||||| ||
Sbjct 102242 ATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACCCT 102200
>seq181
Length=31899
Score = 89.7 bits (98), Expect = 1e-12
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260
||| || || | ||| || | ||||| |||||||| |||| ||||||| ||||||||
Sbjct 13812 CTGCCCACCCTACAAAATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCGCA 13753
Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320
| ||| || ||||| ||||||||||| || | ||||| || || ||||||||
Sbjct 13752 GAGCGCGCTGCGCCGCACGATGGAGACATACAGTAAGATCACGCGCTTCTGTCTGGTGTG 13693
Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377
|||||||| || ||||| | || ||||| ||| ||| ||||| || ||
Sbjct 13692 TAACTACGTCACGCGAATCATTGATCCCCTGGCGAGTCGATGCAGTAAGTTCCGCTT 13636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073758544392128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |