Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq39 107 4e-18 seq98 100 6e-16 >seq39 Length=231448 Score = 107 bits (118), Expect = 4e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||| |||||||| ||||| || || ||| || || ||||| |||||| Sbjct 102503 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCC 102562 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 ||||| ||||| || | | | | | | |||||| || || || |||| |||| ||| Sbjct 102563 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTG-GTGT 102621 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || ||||| |||||||| || || || || | |||||||| | || Sbjct 102622 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 102681 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || || | || || ||||||||||| || || |||||||||||||| Sbjct 102682 TGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 102741 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || | |||| Sbjct 102742 GTGCTGTGGCCTCTCA 102757 >seq98 Length=123527 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 9/228 (4%) Strand=Plus/Minus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904 |||||||||||||| | ||||| ||| ||||| ||| |||| |||| | Sbjct 98241 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCCACCTT 98185 Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964 || | | | |||||||| ||||| ||||| || |||||||| ||| | ||||| Sbjct 98184 CGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGC 98125 Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024 |||||||||||| ||||||| | || | || |||| || |||| ||||| ||| | Sbjct 98124 CTCCATTTTCTGGCTCAAGAAACGTGGCCTCATGGCTGGCCTGACCTTTTCCAACGAGCT 98065 Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||| || | ||||| ||||| || ||||| || ||| | || || Sbjct 98064 CATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 98017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576760265305