Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq39 107 4e-18
seq98 100 6e-16
>seq39
Length=231448
Score = 107 bits (118), Expect = 4e-18
Identities = 179/256 (70%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||| |||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 102503 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCC 102562
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || || || |||| |||| |||
Sbjct 102563 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTG-GTGT 102621
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || || || | |||||||| | ||
Sbjct 102622 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 102681
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || || | || || ||||||||||| || || ||||||||||||||
Sbjct 102682 TGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 102741
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 102742 GTGCTGTGGCCTCTCA 102757
>seq98
Length=123527
Score = 100 bits (110), Expect = 6e-16
Identities = 159/228 (70%), Gaps = 9/228 (4%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904
|||||||||||||| | ||||| ||| ||||| ||| |||| |||| |
Sbjct 98241 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCCACCTT 98185
Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964
|| | | | |||||||| ||||| ||||| || |||||||| ||| | |||||
Sbjct 98184 CGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGC 98125
Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024
|||||||||||| ||||||| | || | || |||| || |||| ||||| ||| |
Sbjct 98124 CTCCATTTTCTGGCTCAAGAAACGTGGCCTCATGGCTGGCCTGACCTTTTCCAACGAGCT 98065
Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| || | ||||| ||||| || ||||| || ||| | || ||
Sbjct 98064 CATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 98017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989576760265305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |