Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq39 188 9e-43
seq98 122 1e-22
>seq39
Length=231448
Score = 188 bits (208), Expect = 9e-43
Identities = 567/866 (65%), Gaps = 16/866 (2%)
Strand=Plus/Plus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||| |||| ||||||||||| ||||||| | | | | || | | ||||||
Sbjct 101900 GCAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGAGCAGAGTACTCGACAATCTCA 101959
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| || || | ||| || || | || | || || ||||| ||| ||
Sbjct 101960 GTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 102019
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || | ||||| || | || || ||| ||||||| || | ||| | | |
Sbjct 102020 GCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 102079
Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCT--TTCGTATAGA--- 63176
|| | | || | ||||| || | ||| | |||| | || ||| |||
Sbjct 102080 CAAA-GCTTCTGGGCCTTGATGGTC---TTGCGAC-CCTTACCCTCCTTCTCGTAGCCCT 102134
Query 63177 -GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGG 63235
||| | | |||||||| || || |||| | |||||| ||| ||||| | ||
Sbjct 102135 CGTAGAGCGCC--TCGAACTCATCGCCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGG 102192
Query 63236 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63295
||||| | | ||| || |||| | || || || ||||| |||||||| || |||||
Sbjct 102193 GCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCA 102252
Query 63296 AAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 63354
||||| || || || || | | | |||||| || || |||||| | || |
Sbjct 102253 GAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGT 102311
Query 63355 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63414
| |||||| | | | ||| | ||||| || || | ||| ||||| | | | || || |
Sbjct 102312 CCAGGAACTCGAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCGGGGC 102371
Query 63415 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 63474
| ||||| || || || || | ||| || |||||||| ||| | || | | ||| ||||
Sbjct 102372 GCTTGTTGCCACCTTGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATGGGAA 102431
Query 63475 TAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTAC 63534
|||||||| || | || |||||||||| ||| || | ||| ||||||| ||| |
Sbjct 102432 CGATACCGTTCGAGTTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATACGAT 102491
Query 63535 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63594
|| | || || || || || | || ||||| | || ||| || | ||||
Sbjct 102492 GGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGT 102551
Query 63595 CATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63654
||||||| || || || ||||| || |||||| | | || ||| |||| |||
Sbjct 102552 CATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGG 102611
Query 63655 GACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63714
| | || || ||||| || | || || |||||||| || || |||| ||| |
Sbjct 102612 CCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACA 102671
Query 63715 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63774
|| ||||| ||||| || | || |||||| ||||| || || || ||||
Sbjct 102672 TGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACAC 102731
Query 63775 GCATTAACATGTGCTGAGGTCTTTCA 63800
|||| | ||||||||| || || |||
Sbjct 102732 GCATAATCATGTGCTGTGGCCTCTCA 102757
>seq98
Length=123527
Score = 122 bits (134), Expect = 1e-22
Identities = 363/554 (66%), Gaps = 7/554 (1%)
Strand=Plus/Plus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | || || || ||||| || || || |||||| |
Sbjct 97722 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 97781
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
||| || || || |||||||| || || || ||||| ||||| | || | | |
Sbjct 97782 CAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTAC 97840
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 97841 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 97900
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || || || || ||| || |
Sbjct 97901 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACGG 97960
Query 33517 CATTTGTTATAATAAATCTAACGGT-TTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
| | || || | | ||||| ||||| | || || ||| | || ||
Sbjct 97961 CCTCGGTAATGACGTCTTGAACGGCCTTCTTGCTTGGGCGG-TGTCTGAGGTGGGAGAAG 98019
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635
| | || ||||| || ||| ||||||||||| | || | ||||| |||||
Sbjct 98020 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAG 98079
Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695
|| || || | ||| |||||||| || || ||||| || ||||| ||||| || || ||
Sbjct 98080 GTCAGGCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAG 98139
Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33752
|||||||| || || || ||||| ||||||| || | || | | || | |
Sbjct 98140 AAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTA 98199
Query 33753 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812
|| || |||||| | ||||| ||||||||||| || | ||||| || || || |||
Sbjct 98200 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATG 98259
Query 33813 GCATTAAAGAGATA 33826
||||| ||||| ||
Sbjct 98260 GCATTGAAGAGGTA 98273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813104676880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |