Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq98 131 2e-25 >seq98 Length=123527 Score = 131 bits (144), Expect = 2e-25 Identities = 178/248 (72%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||| ||||||||||| | || || ||||||||||| || || Sbjct 98026 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGG 98085 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || | ||| |||||||| || || ||||| || ||||| || || || ||||| |||||| Sbjct 98086 CCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAAG 98145 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || || || |||||||| || | || | | ||| | | || || Sbjct 98146 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTATCTTGG 98205 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 98206 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTG 98265 Query 50197 AAGAGATA 50204 ||||| || Sbjct 98266 AAGAGGTA 98273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263673356440