Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq98 116 5e-21 >seq98 Length=123527 Score = 116 bits (128), Expect = 5e-21 Identities = 362/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || ||| |||||||| || | || | ||||||||||| || || Sbjct 98026 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGG 98085 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || | ||| |||||||| || || ||||| || || || || || || ||||| |||||| Sbjct 98086 CCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAAG 98145 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241 || || || || || || ||||||| || | || | | || | | || || Sbjct 98146 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTATCTTGG 98205 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 98206 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTG 98265 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 ||||| || | || | || || | ||||| ||||| | || || | Sbjct 98266 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 98325 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || | |||||||| || || || || || |||||||| || | ||| || | | | Sbjct 98326 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 98385 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || || | | || || || | || ||||| || ||||||||| || || Sbjct 98386 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 98445 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCA 42537 || || |||| || || || || || || | || || | || ||||| Sbjct 98446 AAGAAAGCCAGAACGTGGGAGATGAAGTAGCGCTCAT-CGTCATTGAGGCGGTTGTTCCA 98504 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 || | | || || || | ||| | || ||| | ||||| || || ||||| ||||| Sbjct 98505 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGCCTT 98564 Query 42598 TTTATACATATTCCAGAT 42615 || ||||| | |||||| Sbjct 98565 CTTGTACATCTGCCAGAT 98582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134409743960