Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq98 168 1e-36 seq39 145 1e-29 seq19 84.2 3e-11 >seq98 Length=123527 Score = 168 bits (186), Expect = 1e-36 Identities = 373/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| | || || || ||||| | || ||| | ||||| Sbjct 98582 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 98523 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | ||| |||||| | || || || Sbjct 98522 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 98463 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || |||| ||||| |||| || || ||||| |||||||| || || | || Sbjct 98462 CACGTTCTGGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 98403 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||| | ||||| ||||| |||||||||||||| Sbjct 98402 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 98343 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||| | || | ||||| || || |||| ||||| || | | Sbjct 98342 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 98283 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || ||||| || || || || || | || | || || ||||| Sbjct 98282 CAACGCACATAC---CTCTTCAATGCCATTGAGACCATTCCTTGCATCAAGAAGAAGGCC 98226 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || |||||||| | || | | || | | ||| | | || || || Sbjct 98225 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCCACCTTCGCTCAGCGTCTCGTTGCC 98166 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| ||||| ||||| |||||||| || || || || |||| || ||||||||| Sbjct 98165 TTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 98106 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 || || || |||||| | || ||||| |||||| | || || || |||||||| Sbjct 98105 AAACGTGGCCTCATGGCTGGCCTGACCTTTTCCAACGAGCTCATCTCCCGTGACGAGGGT 98046 Query 125556 CTACACTGTGACTTTGCC 125573 || ||| |||||| ||| Sbjct 98045 CTCCACACTGACTTCGCC 98028 >seq39 Length=231448 Score = 145 bits (160), Expect = 1e-29 Identities = 324/481 (67%), Gaps = 4/481 (1%) Strand=Plus/Minus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || || ||||| || || || || ||| | ||| ||||| | || || ||| Sbjct 102396 TACGTTGACCAAGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATCTACGTCGAGCCATGG 102337 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 |||||||| || || || || | || || | || ||| ||| || || | || Sbjct 102336 CACGCGGATGTCTTCGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAGGAAGTCCGT 102277 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| | | Sbjct 102276 GCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTCGAGAAG 102217 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| ||| ||||||||| || | || || || | || | ||| Sbjct 102216 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTTACGGC 102157 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165 || ||||| ||||| ||| || ||||||| | ||||| | || |||| | | Sbjct 102156 GATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACCA-T 102098 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | | || | |||| || ||| | |||| | | ||||| ||||| |||| || | Sbjct 102097 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 102039 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| | ||||||||| | || ||||| |||||||| || | || |||||| Sbjct 102038 TCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 101979 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 ||||||| |||||||| || ||||| |||||| | |||| || ||| ||| || | Sbjct 101978 GCAGCTCCAACCTGTGCACTGAGATTGTCGAGTACTCTGCTCCAGATGAGGTGGCCGTGT 101919 Query 97345 G 97345 | Sbjct 101918 G 101918 >seq19 Length=317467 Score = 84.2 bits (92), Expect = 3e-11 Identities = 89/116 (77%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105 ||||| |||||| | ||||| || || || || || ||||||||||||||| ||||| Sbjct 26487 GGCTT-ACCGACCGTGCGGAGGGTGACCTCGGCCCTGTCTACGGATTCCAGTGGCGGCAC 26545 Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161 | ||| ||||||| || || | |||| ||||| |||| ||||| |||||||| Sbjct 26546 TTCGGCGCCAAGTACGTGGATGCCCAGACGGACTACACGGGGCAGGGCGTTGATCA 26601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053910689960