Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq98 168 1e-36
seq39 145 1e-29
seq19 84.2 3e-11
>seq98
Length=123527
Score = 168 bits (186), Expect = 1e-36
Identities = 373/558 (67%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | |||||
Sbjct 98582 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 98523
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | || | | ||| |||||| | || || ||
Sbjct 98522 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 98463
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || |||| ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 98462 CACGTTCTGGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 98403
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| ||||||||||||||
Sbjct 98402 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 98343
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 98342 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 98283
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || || || || | || | || || |||||
Sbjct 98282 CAACGCACATAC---CTCTTCAATGCCATTGAGACCATTCCTTGCATCAAGAAGAAGGCC 98226
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || |||||||| | || | | || | | ||| | | || || ||
Sbjct 98225 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCCACCTTCGCTCAGCGTCTCGTTGCC 98166
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| ||||| ||||| |||||||| || || || || |||| || |||||||||
Sbjct 98165 TTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 98106
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
|| || || |||||| | || ||||| |||||| | || || || ||||||||
Sbjct 98105 AAACGTGGCCTCATGGCTGGCCTGACCTTTTCCAACGAGCTCATCTCCCGTGACGAGGGT 98046
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| |||||| |||
Sbjct 98045 CTCCACACTGACTTCGCC 98028
>seq39
Length=231448
Score = 145 bits (160), Expect = 1e-29
Identities = 324/481 (67%), Gaps = 4/481 (1%)
Strand=Plus/Minus
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| || || ||||| || || || || ||| | ||| ||||| | || || |||
Sbjct 102396 TACGTTGACCAAGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATCTACGTCGAGCCATGG 102337
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
|||||||| || || || || | || || | || ||| ||| || || | ||
Sbjct 102336 CACGCGGATGTCTTCGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAGGAAGTCCGT 102277
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| | |
Sbjct 102276 GCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTCGAGAAG 102217
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| |||||| ||| ||||||||| || | || || || | || | |||
Sbjct 102216 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTTACGGC 102157
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165
|| ||||| ||||| ||| || ||||||| | ||||| | || |||| | |
Sbjct 102156 GATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACCA-T 102098
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | |||| | | ||||| ||||| |||| || |
Sbjct 102097 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 102039
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| | ||||||||| | || ||||| |||||||| || | || ||||||
Sbjct 102038 TCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 101979
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
||||||| |||||||| || ||||| |||||| | |||| || ||| ||| || |
Sbjct 101978 GCAGCTCCAACCTGTGCACTGAGATTGTCGAGTACTCTGCTCCAGATGAGGTGGCCGTGT 101919
Query 97345 G 97345
|
Sbjct 101918 G 101918
>seq19
Length=317467
Score = 84.2 bits (92), Expect = 3e-11
Identities = 89/116 (77%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105
||||| |||||| | ||||| || || || || || ||||||||||||||| |||||
Sbjct 26487 GGCTT-ACCGACCGTGCGGAGGGTGACCTCGGCCCTGTCTACGGATTCCAGTGGCGGCAC 26545
Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161
| ||| ||||||| || || | |||| ||||| |||| ||||| ||||||||
Sbjct 26546 TTCGGCGCCAAGTACGTGGATGCCCAGACGGACTACACGGGGCAGGGCGTTGATCA 26601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053910689960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |