Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq12 100 4e-17
seq35 98.7 2e-16
>seq12
Length=384923
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||||
Sbjct 6850 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCTAT 6908
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| || ||||||||||| ||||||||| ||||
Sbjct 6909 CAGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTC 6947
>seq35
Length=242141
Score = 98.7 bits (108), Expect = 2e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600
|| ||||||| |||| ||| | |||| ||||||| || || |||| ||| || ||
Sbjct 147750 TACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTC 147809
Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660
||| ||||||||||| || || ||||| ||||||||| | || | ||||| || ||
Sbjct 147810 ACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTG 147869
Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| ||||||||||| | | || ||||| || |||||
Sbjct 147870 AAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 147908
Score = 91.5 bits (100), Expect = 2e-14
Identities = 78/94 (83%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 147588 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCTGCCAT 147646
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
||| ||||| || |||||||| || |||||||||
Sbjct 147647 CCGCCGTCTTGCACGTCGTGGAGGTGTCAAGCGT 147680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074677930703
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |