Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq39 203 4e-47 seq98 131 2e-25 >seq39 Length=231448 Score = 203 bits (224), Expect = 4e-47 Identities = 578/879 (66%), Gaps = 16/879 (2%) Strand=Plus/Plus Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 || ||||| ||| |||| ||||| ||||| ||||||| | | | | || | | || Sbjct 101896 CAGGGCAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGAGCAGAGTACTCGACAAT 101955 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||||||||| || || | ||| || || | || | || || ||||| ||| Sbjct 101956 CTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTT 102015 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 || |||||||| || | ||||| || | || || ||| ||||||| || | ||| | Sbjct 102016 GCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGA 102075 Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCT--TTCGTATAG 63124 | ||| | | || | ||||| || | ||| | |||| | || ||| ||| Sbjct 102076 GTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGAC-CCTTACCCTCCTTCTCGTAG 102130 Query 63125 T----GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180 ||| | | |||||||| || || |||| | |||||||||| ||||| | Sbjct 102131 CCCTCGTAGAGCGCC--TCGAACTCATCGCCGTAAACGTCCGCCAATCCAGGGCATTCGT 102188 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 || ||||| | | ||| || |||| | || || || ||||| |||||||| || | Sbjct 102189 TGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGA 102248 Query 63241 TCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63299 |||| ||||| || || || || | || | |||||| || || |||||| | Sbjct 102249 TCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTC 102307 Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359 || || |||||| | | | ||| | ||||| || || | ||| ||||| | | | || Sbjct 102308 AGGTCCAGGAACTCGAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCG 102367 Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419 || || ||||| || || || || | ||| || |||||||| ||| | || | | ||| Sbjct 102368 GGGCGCTTGTTGCCACCTTGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATG 102427 Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479 |||| |||||||| || | || |||||||||| ||| || ||| ||||||| ||| Sbjct 102428 GGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATA 102487 Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539 | || | || || || || || | || ||||| | || ||| || | Sbjct 102488 CGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGT 102547 Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599 ||||||||||||||||| || ||||| || |||||| | | || ||| |||| Sbjct 102548 GTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGC 102607 Query 63600 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659 ||| | || || ||||| || | || || |||||||| || || |||| | Sbjct 102608 TGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAA 102667 Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63719 || | || ||||| ||||| || | || |||||| ||||| || || || Sbjct 102668 GACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCA 102727 Query 63720 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758 |||||||| | ||||||||| || || ||| ||| |||| Sbjct 102728 ACACGCATAATCATGTGCTGTGGCCTCTCAGCGACCTTG 102766 >seq98 Length=123527 Score = 131 bits (144), Expect = 2e-25 Identities = 365/554 (66%), Gaps = 7/554 (1%) Strand=Plus/Plus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| || || | |||||||| || | || || || ||||| || || || |||||| | Sbjct 97722 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 97781 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 ||| || || || |||||||| || || || ||||| || || | || | | | Sbjct 97782 CAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTAC 97840 Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 97841 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 97900 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || | || | ||||| ||| |||| | || || || || ||| || | Sbjct 97901 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACGG 97960 Query 33239 CATCTGTTATAATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 33297 | || || || | | ||||| ||||| | || || || | || || Sbjct 97961 CCTCGGTAATGACGTCTTGAACGGCCTTCTTGCTTGGGCGG-TGTCTGAGGTGGGAGAAG 98019 Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357 | | || ||||| || ||| ||||||||||| | || || ||||||||||| Sbjct 98020 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAG 98079 Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417 || || || | ||| |||||||| || || ||||| || ||||| ||||| || ||||| Sbjct 98080 GTCAGGCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAG 98139 Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33474 |||||||| || || || ||||| ||||||| || | || | | || | | Sbjct 98140 AAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTA 98199 Query 33475 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534 || || |||||| | ||||| ||||||||||| || | ||||| || || || ||| Sbjct 98200 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATG 98259 Query 33535 GCATTAAAGAGATA 33548 ||||| ||||| || Sbjct 98260 GCATTGAAGAGGTA 98273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942753714360