Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq65 96.9 2e-15 >seq65 Length=170753 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| |||||||| |||||| ||||||||||| || | Sbjct 103494 TACCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGG 103435 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | || |||| || | || || || || || || ||||| || || || | | Sbjct 103434 ACAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAG 103375 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTC 38266 | | ||| || |||||| || || ||||||||| | || ||| || | || || Sbjct 103374 GAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATAGTGTCGGACGAC--TC 103317 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| || || || || || || || || | ||| || ||||| |||||||| Sbjct 103316 AACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944869081501