Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq98 122 1e-22 >seq98 Length=123527 Score = 122 bits (134), Expect = 1e-22 Identities = 364/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | || | ||||||||||| || || Sbjct 98026 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGG 98085 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || | ||| |||||||| || || ||||| || ||||| || || || ||||| ||||| Sbjct 98086 CCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAAG 98145 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837 || || || || || || ||||||| || | || | | || | | || || Sbjct 98146 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTATCTTGG 98205 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 98206 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTG 98265 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 ||||| || | || | || || | ||||| || || | || || | Sbjct 98266 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 98325 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || | |||||||| || || ||||| || ||||||||||| | || || | ||| Sbjct 98326 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 98385 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || || || | | || || || | || || || || ||||||||| || || Sbjct 98386 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 98445 Query 33078 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTC-TGGTGTTAGTTTATTCCA 33133 || || |||| || || || || || | ||||| | | | | || ||||| Sbjct 98446 AAGAAAGCCAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCGGTTGTTCCA 98504 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | | || || || | ||| | || || ||||||| || || || || ||||| Sbjct 98505 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGCCTT 98564 Query 33194 TTTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 98565 CTTGTACATCTGCCAGAT 98582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627477451600