Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq65 141 8e-29
seq70 127 2e-24
seq100 98.7 8e-16
>seq65
Length=170753
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || ||| | || || || ||| | || ||||| |||||| | ||
Sbjct 103494 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 103553
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | |||| || ||||||||||||||||||||||| || || ||
Sbjct 103554 GATACCATTGATAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 103613
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| || || ||| | |||||| ||||||| | || || ||||||
Sbjct 103614 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 103673
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || ||| | ||| | ||| | || | || || |||
Sbjct 103674 ATTCAGAAGGAGTCGACCCTGCATCTGGTTCTCCGTCTTCGTGGTGGT 103721
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| || || | || || ||||| || | |
Sbjct 103722 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 103781
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | |||| || || ||||| |||||||| || ||||| || ||
Sbjct 103782 GATACCATCGATAACGTCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 103841
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| ||| | |||||| ||||||| | || |||||||||
Sbjct 103842 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAAC 103901
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| ||||| | ||| | || | || || |||
Sbjct 103902 ATCCAGAAGGAGTCCACGTTACATCTTGTTCTCCGCCTCCGTGGTGGT 103949
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || ||| | | |||||| | ||| | | ||
Sbjct 103062 ACTGGCAAGACCATCACCCTTGAGGTCGAATCGTCTGATACCATCGACAACGTTAAGAGC 103121
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || |||||||||||||| ||||| || || || |||||||| || || ||||||||
Sbjct 103122 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 103181
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| | ||||| ||||||| ||||||| |||||||| || || || || ||| | ||
Sbjct 103182 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 103241
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| || | || |||| || |||
Sbjct 103242 TTGGTCCTCCGTCTGCGTGGTGGT 103265
>seq70
Length=162585
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || || |||| ||||| ||||| | ||
Sbjct 32229 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 32170
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| || || || ||||||||||| ||||| || || ||
Sbjct 32169 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 32110
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | |||||| ||||||| | || |||||||||
Sbjct 32109 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 32050
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | || || || || || | || ||||||
Sbjct 32049 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGT 32002
>seq100
Length=120018
Score = 98.7 bits (108), Expect = 8e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| || || || || || || || || |||| ||||| || || || ||||||| |
Sbjct 34660 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 34601
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || || ||||||||||| ||||| || || || || || ||
Sbjct 34600 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 34541
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| ||||| ||| | |||||| ||||| | ||||| |||||||| || ||
Sbjct 34540 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 34482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419725079086615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |