Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq65 161 2e-34 seq100 116 7e-21 seq98 96.9 6e-15 seq91 86.0 1e-11 >seq65 Length=170753 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | |||||||| || || ||||| || || || || || ||||| Sbjct 103492 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGAC 103433 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || ||| Sbjct 103432 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 103373 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||| ||||| | || || || Sbjct 103372 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACC 103313 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 103312 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||| ||||||||| || |||||||| ||||| || Sbjct 103948 CCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGAC 103889 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| ||||| Sbjct 103888 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 103829 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| | ||||||| |||||||| || | || || ||| Sbjct 103828 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 103769 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 103768 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 104176 CCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 104117 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | |||||| || || || || | | || ||||| ||||| Sbjct 104116 AGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGG 104057 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| || |||||||| | || || || Sbjct 104056 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 103997 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || | |||||||||||| |||||||| Sbjct 103996 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| || || || ||||| || || ||||| || || || Sbjct 103720 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 103661 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 103660 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 103601 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| || ||||| || | |||||| || Sbjct 103600 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 103541 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || ||||| || |||||||| || |||||||| Sbjct 103540 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| || |||||| Sbjct 103264 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 103205 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || ||| Sbjct 103204 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 103145 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||| ||| |||||||| || | ||||| || Sbjct 103144 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCAGACGATTCGACC 103085 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 103084 TCAAGGGTGATGGTCTTGCCAGT 103062 >seq100 Length=120018 Score = 116 bits (128), Expect = 7e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 34482 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 34541 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||| || |||||||| || ||||| | |||||| ||| Sbjct 34542 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 34601 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 34602 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 34660 >seq98 Length=123527 Score = 96.9 bits (106), Expect = 6e-15 Identities = 313/474 (66%), Gaps = 14/474 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || |||||||||||||| ||| || | Sbjct 97722 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 97781 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTC-TCGGCGCCAAACTGCTTGGGGTAAC 10053 | ||| ||| |||||||||||| || ||||| ||| | | | ||| || || Sbjct 97782 CAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTAC 97840 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | | ||| || |||||||| ||||| || |||||| || | || Sbjct 97841 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 97900 Query 10114 TCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||||| | || ||| ||||| | || || | ||| |||| ||| || ||| Sbjct 97901 TCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACG 97959 Query 10173 GCTTCCTCGACGATGCTCTTTACCA--CGTCAAG---GGACAGCTTGTTCTCGAGCTTCG 10227 || || | || | |||| | | | || | || | | ||| || ||| | | Sbjct 97960 GCCTCGGTAATGACG-TCTTGAACGGCCTTCTTGCTTGGGCGG--TGT-CT-GAGGTGGG 98014 Query 10228 AATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGG 10287 | | ||||| | || | |||||| |||||||| ||| ||||| |||||||| Sbjct 98015 AGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGG 98074 Query 10288 ACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACC 10347 | || ||| || | |||||| || || || ||||||||||||| | ||| || | Sbjct 98075 AAAAGGTCAGGCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGC 98134 Query 10348 CGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | ||||| | | |||||| ||| | |||| ||||| |||| ||||||| Sbjct 98135 CAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGG 98188 >seq91 Length=135597 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495 ||| ||| | || |||||||| |||||||| || || || | ||| | | | || | Sbjct 89736 GCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAAACGATTAGGGAGGTGATCTCGGTGTG 89677 Query 225496 GCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGT 225553 | ||| |||| | || |||||| |||||| || |||| ||| || |||||| Sbjct 89676 GGTCTTCAGGTAATCCTG--GAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGT 89619 Query 225554 TCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATT 225613 ||||||||||| || | || || | || | || || | | |||| |||||||| Sbjct 89618 TCGTCCAGAAGGAGAACATCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATC 89559 Query 225614 TTCCAGCCCCCGGACAGGGAGCCGA 225638 ||||| || |||||||| ||||||| Sbjct 89558 TTCCATCCACCGGACAGAGAGCCGA 89534 Score = 84.2 bits (92), Expect = 4e-11 Identities = 129/182 (71%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||||||| | || || || |||||| || | Sbjct 90201 GGCGTAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCAACGTGCTC 90142 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | || ||||| | ||| | || |||| |||||| |||||| ||| ||| Sbjct 90141 CAGGGCGTGCTGCTTGATGTAACCAATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 90085 Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149 ||| ||||| | |||||| || |||| ||| ||||| || | ||| || ||||| | Sbjct 90084 AGT-GGTTGGGATGGTCTCGCCAGTCAGGAGCTTAATGAGAGTGGACTTTCCGGCACCGT 90026 Query 225150 TG 225151 || Sbjct 90025 TG 90024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921615821920120