Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq65 125 2e-23 seq70 114 3e-20 seq100 102 2e-16 seq98 89.7 1e-12 >seq65 Length=170753 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | |||| || || ||||| || || || | Sbjct 103948 CCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGAC 103889 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||| ||||| ||||| || |||| Sbjct 103888 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 103829 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| ||||| || | || ||||| || || | ||| ||| || ||| Sbjct 103828 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 103769 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| ||||| |||||||||||||| || ||||| Sbjct 103768 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| || || || || ||||| ||||||| Sbjct 103492 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGAC 103433 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| ||||| ||||| || || Sbjct 103432 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 103373 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| ||||| || || |||| ||| ||| || || Sbjct 103372 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACC 103313 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || || || ||||||||||| |||||||| Sbjct 103312 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||||| || || ||||| || |||||| ||||| | || || || | || Sbjct 104152 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGC 104093 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||||| |||||| || |||||| || || |||||||| || || Sbjct 104092 TTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTG 104033 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || || | || || || || ||||| || || ||||| || ||| Sbjct 104032 GACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTC 103973 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | ||||||||||| |||||||| Sbjct 103972 AAGGTCTTGACGAAAATCTGCAT 103950 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/173 (74%), Gaps = 8/173 (5%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | ||| || || |||||| Sbjct 103228 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAG 103169 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398 |||||||| || || || ||| ||||| || || || ||||| || ||| || || Sbjct 103168 ATCAGACGTTGCTG---GTCCGGGGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAAC 103113 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 ||| || || | ||| |||||| || || || ||||| ||||| || |||| Sbjct 103112 GTTGTCGATGGTATCAGACGATTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 103060 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | || || || || || || ||||| | Sbjct 103720 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 103661 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| ||||| || || Sbjct 103660 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 103601 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || || |||| || ||||| || || | |||| ||||| || Sbjct 103600 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 103541 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| || || ||||||||||| || |||||||| Sbjct 103540 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 >seq70 Length=162585 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || |||||||| || || | |||| ||| || || ||||| || || || | Sbjct 32003 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 32062 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || || ||| Sbjct 32063 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 32119 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || | || || || || |||| |||| ||| || Sbjct 32120 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 32179 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 32180 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 32229 >seq100 Length=120018 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || |||||||| || || | || || || || |||||| Sbjct 34482 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 34541 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || || ||||| || || |||||||| |||| || || || || Sbjct 34542 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 34601 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 |||| |||| || || || || || ||||| ||||| || |||| ||||||||||| Sbjct 34602 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 34660 >seq98 Length=123527 Score = 89.7 bits (98), Expect = 1e-12 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| || | || ||| | || |||| ||||| ||| | | ||||| Sbjct 97943 GAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAG 97884 Query 269179 CAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 ||||| || || ||||| || || | | || | | | |||||| | ||||| || Sbjct 97883 CAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC-CTCGGTAACGAGAAGTACTA 97825 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 ||| |||| || || |||| ||| ||||| || || | | ||||||||| ||||| Sbjct 97824 CAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCAGGAAAGACCAACTT 97765 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 |||||| ||||| ||| |||||| ||| ||||||| ||| Sbjct 97764 CTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 97722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645769722138