Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq65 113 4e-20
seq70 93.3 4e-14
>seq65
Length=170753
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || ||||| || ||||||||||| ||| |
Sbjct 103492 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGAC 103433
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| | |||| |||||||| || |||||
Sbjct 103432 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 103373
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| ||| ||| | | |||| ||||| | ||| ||
Sbjct 103372 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACC 103313
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || || || ||||||||
Sbjct 103312 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||| ||| | || ||||| || ||||| ||||| || |
Sbjct 103720 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 103661
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| |||||| |||||||| || |||||
Sbjct 103660 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 103601
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| || ||| ||||| | || | ||| || | || ||
Sbjct 103600 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 103541
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| ||||| || ||||| || ||||||||||||||
Sbjct 103540 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | || | ||||| ||| ||||| || || || |||||||| |
Sbjct 103948 CCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGAC 103889
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| | |||| |||||||| || || ||
Sbjct 103888 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 103829
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || ||| || ||||| | |||| ||| |||| |||||||
Sbjct 103828 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 103769
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||| ||||| || || || || |||||
Sbjct 103768 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || ||| || || || ||||| |||| || ||| | ||| ||
Sbjct 104159 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 104100
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || ||||| ||||||| |||||||| || || || || |||||||| |||
Sbjct 104099 CAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 104040
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| || ||||| ||||| | | |||||||| | ||| || |||| || | || |
Sbjct 104039 AATCTTGGACTTGACGTTGT-CAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 103981
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || |||| || || || |||||||||||
Sbjct 103980 TTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950
>seq70
Length=162585
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || || || | || || ||||| || | || ||||| || || || ||||||||
Sbjct 32000 GCACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCC 32059
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| ||||| ||| || ||||| || || ||| |||||| |||||||| || ||
Sbjct 32060 GAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 32119
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || |||||||||||| ||| || ||||| | |||| || || | |||
Sbjct 32120 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 32179
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 32180 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 32233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475497406113040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |