Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq65 104 2e-17 >seq65 Length=170753 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| | ||| || ||||| ||||| || ||||| Sbjct 103951 ATACCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCA 103892 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | |||| || ||||||||||| Sbjct 103891 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 103832 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | ||| || || ||||| Sbjct 103831 GGGATGCCCTCCTTATCTTGGATCTTGGACTTGA-CGTTATCGATGGTATCCGACGACTC 103773 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| ||||| || || || |||||||| Sbjct 103772 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || |||||||| || || ||||| || || || || || | ||| ||| ||| Sbjct 103702 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 103643 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || || | |||| || ||||||||||| ||||| || || || |||||| Sbjct 103642 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 103583 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||| ||||| || || || || || |||| ||| || Sbjct 103582 ATCTTCGACTTGA-CGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 103524 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || ||||| || |||||||| ||||| Sbjct 103523 GCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | || | ||| |||| || || || || | Sbjct 104140 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAG 104081 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| || ||||||||||| || || || || ||||| ||||| || |||| || | Sbjct 104080 ATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 104022 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| |||||||| || |||||||||| || || || || | || || || Sbjct 104021 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 103962 Query 45329 AAAAATTTGCAT 45340 ||||| ||||| Sbjct 103961 GAAAATCTGCAT 103950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999973827160