Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11 230 3e-55 seq27 125 9e-24 seq38 91.5 2e-13 >seq11 Length=403485 Score = 230 bits (254), Expect = 3e-55 Identities = 499/742 (67%), Gaps = 10/742 (1%) Strand=Plus/Minus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||||||||| | || ||||| | |||||| || ||| | |||||||| Sbjct 32783 TTCTTATGTTTCCTCTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTGTCGAAATCC 32724 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| || || || || || | ||||| || |||||||| | || ||| Sbjct 32723 TCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCGATG 32664 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | | || ||||| || || |||||||| ||||| || || || ||||| || Sbjct 32663 GTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGGTCGAAGATCAGGACGTTGCGCTCA 32604 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | || ||||| || |||||||| || || || || || || || || || || ||| Sbjct 32603 CCCTCGACCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCGGTAGGCTCGTTGATGATA 32544 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 || || ||| || || || || | ||||| || || || || || || || ||| Sbjct 32543 CGGAGGACGTTGAGTCCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGGGAGTCG 32484 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || ||||| || ||||| || || || |||| |||| | ||||| || | || Sbjct 32483 TTGAAGTAAGCTGGGACGGTGACAACAGCGTTGTTGACGGTTCCGCCGAGGTAGGCCTCA 32424 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 || | || ||| ||| || | ||| || || ||||| || | | || | || Sbjct 32423 GCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTGAATTCCTTG 32364 Query 7826 GTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883 || || || || || || || | || | ||| || || | | | ||| | || Sbjct 32363 GTCTCGCCCTTGAACTCGACCTGGCAGAC-TGGCTTG--CCTC--CCTTGTCGATGATCT 32309 Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943 | | | | | ||||| ||| | ||||||| ||| | ||||| | ||||| | Sbjct 32308 TGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGGCGAACTTGCGACCGATCA 32249 Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003 ||||||| || || || || ||||| | ||||||||||| |||||||| || || | Sbjct 32248 GACGCTTGGCGTCGAAGACGGTGTTGGTTGGGTTCATGGCGACCTGGTTCTTGGCGGCAT 32189 Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCC 8063 | ||||| ||||| || | || || || |||||| |||||||||| || || || | Sbjct 32188 CACCGATCAGACGCTC---GGTGTCAGTGAAGGCGACGAACGATGGGGTTGTGCGGTTGC 32132 Query 8064 CTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACG 8123 | |||||||| ||||| || || | |||||| | | ||| || |||||||| || | Sbjct 32131 CCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGCACGAGTAGG 32072 Query 8124 TTGTTCCTAAATCAATACCGAT 8145 | || || ||||| |||||||| Sbjct 32071 TGGTACCCAAATCGATACCGAT 32050 Score = 116 bits (128), Expect = 5e-21 Identities = 250/374 (67%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 || || || || ||||| | || ||||| || || |||||||| ||||| || | || Sbjct 33227 AAAATTGCTGCCTGGACAGCAGCTCCGTAAGCCACAGCCTCATCAGGGTTGATGGACTTG 33168 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 || | || || ||||| || || || | | | | || ||| | ||||| || || Sbjct 33167 TTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATGAGCTTCTGGATTCTTGGGATACGGGTG 33108 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || || ||||| | ||||| || | || || | || |||| ||| | ||| || Sbjct 33107 GAACCTCCGACGAGGACGATCTCGTGAACCTTGGTCTTGTCGAGCTTGGCGTCCGCGAGG 33048 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 ||||| || | | | |||||| | ||| ||||| |||||||| || Sbjct 33047 ACGCGGTCGACGGGCTGGAGAGTGGAACGGAAGAGATCCTGGCACAGCTCCTCAAAGCGG 32988 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||| || || || ||||||||||| || ||| | | || || || || |||| Sbjct 32987 GCACGGGTGATCGAGGTGTAGAAATCAACACCCTCGAAGAGAGAGTCGATCTCGATGGAG 32928 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || | || || | || ||||| || ||||| || || || || | |||||| Sbjct 32927 GTCTGGGCAGAGGACGAAAGAGTGCGCTTGGCACGCTCGCATGCGGTGCGGAGACGACGG 32868 Query 7379 AGGGCACGCGGGTT 7392 |||||||| | ||| Sbjct 32867 AGGGCACGGGCGTT 32854 >seq27 Length=261754 Score = 125 bits (138), Expect = 9e-24 Identities = 226/327 (69%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || ||| || Sbjct 155167 TCGAAATCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGAAAGAACCTCGAAGGCGCCA 155108 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || || ||||| || || | | || | Sbjct 155107 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTAGACGATGA-- 155050 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | | | ||||||| |||||||| |||| || || || ||||| || Sbjct 155049 -TC-TGGCGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 154992 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || || ||| || || ||||| | ||||| || || || |||| Sbjct 154991 GTTGACAATGCGGAGGACGTTAAGTCCGGCAATGACACCAGCATCCTTGGTGGCCTGTCT 154932 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| Sbjct 154931 CTGGTTGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAG 154872 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| ||| ||||| || Sbjct 154871 GTAAGACTCAGCGACATCCTTCATCTT 154845 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/182 (72%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| ||| | ||||||||| || ||||| |||| || || || | Sbjct 154607 GTGTTCTTTGGGTTCGCGGCAGCTTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCC 154548 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 154547 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 154491 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || | | || ||| || ||||| || || || || ||||| |||||||||||| Sbjct 154490 TCGACCTTGCCATTCTGCATCACACCGACACAAGAGTAGGTGGTTCCCAAATCAATACCG 154431 Query 8144 AT 8145 || Sbjct 154430 AT 154429 >seq38 Length=231896 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || |||||||| |||| ||| || || || || || || | | ||| ||| ||| Sbjct 33016 CTTCTCAAGACCGTAAGCGAGAGCAGCGGCGGTAGGCTCGTTGACGACACGGAGAACGTT 32957 Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||||||| ||| | ||||| || || ||||| || || || ||||| ||||| Sbjct 32956 CAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTTGACGCTGGGAGTCGTTGAAGTAA 32899 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742 || ||||| || || || |||| | ||| Sbjct 32898 GCTGGGACGGTAACAACGGCGTTCTTGA 32871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128266739640