Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq17 116 4e-21
seq210 87.8 2e-12
seq45 87.8 2e-12
seq183 86.0 7e-12
seq24 86.0 7e-12
>seq17
Length=348162
Score = 116 bits (128), Expect = 4e-21
Identities = 330/500 (66%), Gaps = 13/500 (3%)
Strand=Plus/Minus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
|||||| ||||| || || | ||||| | || | || ||| | ||| ||| | ||
Sbjct 172339 ATCGAAGCGACCAGGACGCATGAGAGCCTTGTCCAAAACATCCGGTCTGTTCGTACCCGC 172280
Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624
| || |||| | || | ||| ||| |||||||| || ||||| | |||||| |
Sbjct 172279 CAGAACAACAACCTGATCCTTAGTGTTGAAGCCGTCCATCTCCGTGAGGATCTGGTTCAG 172220
Query 11625 CGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAA---CGCTTCTTACCG 11679
||| || ||||| ||||| | || | | | || | | | | |||||||
Sbjct 172219 CGTGCTCTCGCGCTCCTCGTT--ACCGCCTCCGAAACCAGACTTCTCTCTCGACTTACCG 172162
Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--CGTGCCTGTTCGA 11737
| ||||| || || |||||||| | |||||| || ||||| | || ||| |||
Sbjct 172161 ATCGCGTCGATTTCGTCGATGAAGATGATACAAGG--GGTTGTCTTGCGCGCCATGGCGA 172104
Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA- 11796
| || || || |||||| || || ||||| ||||||||||| | ||| | | ||
Sbjct 172103 ACAGGTCGCGCACACGCGACGGGCCGACACCAACGAACATCTCCATGAACTCGGAACCAC 172044
Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
|| ||||| ||||||||| ||||| || || |||| || || || ||||||
Sbjct 172043 TGACGCTGAA-GAAGGGAACGCCGGACTCGCCGGCCGTGGCCTTCGCTAGAAGGGTCTTA 171985
Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916
|| || ||||| | |||| || | || || ||||| |||||||| || | ||
Sbjct 171984 CCAGTTCCAGGAGGCCCAGACAGGATAGCACCGCGGGGAATCTTGGCGCCTAGCCTCGAG 171925
Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976
|| ||||| ||| |||| |||||| || | |||| | ||| ||| || ||
Sbjct 171924 TAACGCTCTGGCGTCTTCAGGAAGCTGACGAACTCCATGATCTCCAGCTTTGCCTCATCC 171865
Query 11977 ATACCCTCAACATCGGTGAA 11996
||||| | ||||||| |||
Sbjct 171864 ATACCAGCGACATCGGCGAA 171845
>seq210
Length=22045
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 10061 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 10002
Query 136777 GGGAACAG 136784
| || |||
Sbjct 10001 GTGACCAG 9994
>seq45
Length=216468
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 174716 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 174775
Query 136777 GGGAACAG 136784
| || |||
Sbjct 174776 GTGACCAG 174783
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 174393 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 174452
Query 136777 GGGAACA 136783
| || ||
Sbjct 174453 GTGACCA 174459
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 175595 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 175536
Query 136777 GGGAACA 136783
| || ||
Sbjct 175535 GTGACCA 175529
>seq183
Length=30672
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 26012 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 25953
Query 136777 GGGAACA 136783
| || ||
Sbjct 25952 GTGACCA 25946
>seq24
Length=273537
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 80602 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 80543
Query 136777 GGGAACA 136783
| || ||
Sbjct 80542 GTGACCA 80536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971796183800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |