Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17 116 4e-21 seq210 87.8 2e-12 seq45 87.8 2e-12 seq183 86.0 7e-12 seq24 86.0 7e-12 >seq17 Length=348162 Score = 116 bits (128), Expect = 4e-21 Identities = 330/500 (66%), Gaps = 13/500 (3%) Strand=Plus/Minus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 |||||| ||||| || || | ||||| | || | || ||| | ||| ||| | || Sbjct 172339 ATCGAAGCGACCAGGACGCATGAGAGCCTTGTCCAAAACATCCGGTCTGTTCGTACCCGC 172280 Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624 | || |||| | || | ||| ||| |||||||| || ||||| | |||||| | Sbjct 172279 CAGAACAACAACCTGATCCTTAGTGTTGAAGCCGTCCATCTCCGTGAGGATCTGGTTCAG 172220 Query 11625 CGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAA---CGCTTCTTACCG 11679 ||| || ||||| ||||| | || | | | || | | | | ||||||| Sbjct 172219 CGTGCTCTCGCGCTCCTCGTT--ACCGCCTCCGAAACCAGACTTCTCTCTCGACTTACCG 172162 Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--CGTGCCTGTTCGA 11737 | ||||| || || |||||||| | |||||| || ||||| | || ||| ||| Sbjct 172161 ATCGCGTCGATTTCGTCGATGAAGATGATACAAGG--GGTTGTCTTGCGCGCCATGGCGA 172104 Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA- 11796 | || || || |||||| || || ||||| ||||||||||| | ||| | | || Sbjct 172103 ACAGGTCGCGCACACGCGACGGGCCGACACCAACGAACATCTCCATGAACTCGGAACCAC 172044 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 || ||||| ||||||||| ||||| || || |||| || || || |||||| Sbjct 172043 TGACGCTGAA-GAAGGGAACGCCGGACTCGCCGGCCGTGGCCTTCGCTAGAAGGGTCTTA 171985 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916 || || ||||| | |||| || | || || ||||| |||||||| || | || Sbjct 171984 CCAGTTCCAGGAGGCCCAGACAGGATAGCACCGCGGGGAATCTTGGCGCCTAGCCTCGAG 171925 Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976 || ||||| ||| |||| |||||| || | |||| | ||| ||| || || Sbjct 171924 TAACGCTCTGGCGTCTTCAGGAAGCTGACGAACTCCATGATCTCCAGCTTTGCCTCATCC 171865 Query 11977 ATACCCTCAACATCGGTGAA 11996 ||||| | ||||||| ||| Sbjct 171864 ATACCAGCGACATCGGCGAA 171845 >seq210 Length=22045 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 10061 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 10002 Query 136777 GGGAACAG 136784 | || ||| Sbjct 10001 GTGACCAG 9994 >seq45 Length=216468 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 174716 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 174775 Query 136777 GGGAACAG 136784 | || ||| Sbjct 174776 GTGACCAG 174783 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 174393 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 174452 Query 136777 GGGAACA 136783 | || || Sbjct 174453 GTGACCA 174459 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 175595 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 175536 Query 136777 GGGAACA 136783 | || || Sbjct 175535 GTGACCA 175529 >seq183 Length=30672 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 26012 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 25953 Query 136777 GGGAACA 136783 | || || Sbjct 25952 GTGACCA 25946 >seq24 Length=273537 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 80602 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 80543 Query 136777 GGGAACA 136783 | || || Sbjct 80542 GTGACCA 80536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971796183800