Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq65 116 3e-21
seq70 98.7 8e-16
>seq65
Length=170753
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || || ||| || ||||| ||||| || || || | || | || |||
Sbjct 103702 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 103643
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||| ||||| ||||| ||||| || |||| |||| ||||||||||| |
Sbjct 103642 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 103583
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | | || || | |||||||| | ||||||||| ||
Sbjct 103582 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 103523
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| | ||| || ||||||||||||||
Sbjct 103522 CCCGTAAGAGTCTTGACAAAAATCTGCAT 103494
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || || ||| || ||||||||||| || || ||| | ||| |||| ||
Sbjct 103474 ACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCCTCA 103415
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || ||||| ||||| || |||| |||| ||||||||||||
Sbjct 103414 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 103355
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | || || |||| ||| ||||||| || || || ||
Sbjct 103354 ATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 103295
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || || || ||||||||
Sbjct 103294 CCAGTGAGGGTCTTGACGAAGATCTGCAT 103266
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||||| |||| ||| || || || ||||||||||| || | || | || || | |||
Sbjct 103925 ATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 103866
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || || || ||||| ||||| || |||| || | ||||||||| || |||||
Sbjct 103865 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 103806
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | | | || |||| ||| || |||| |||||| || ||||| ||
Sbjct 103805 GGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGT 103746
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
| ||| || || || || |||||
Sbjct 103745 GAGAGTCTTGACGAAGATTTGCAT 103722
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||| | || || | |||||| || || |||||||| || || || ||||| ||
Sbjct 104177 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 104118
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | | | || |||| |||||| || ||||| |||| ||||| || |||| ||
Sbjct 104117 CAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGG 104058
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||| || |||||| || || | | | || || | ||| ||
Sbjct 104057 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 103998
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| | ||||| || ||||| ||||| || || || |||||||||||
Sbjct 103997 CTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950
>seq70
Length=162585
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| || || || |||||||| || || | || | || ||
Sbjct 32021 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 32080
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || ||||| ||||| || |||| ||||| |||||||||||
Sbjct 32081 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 32140
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | || || |||| ||||||||| | || || || ||
Sbjct 32141 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 32200
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||||| || || || || || |||||
Sbjct 32201 CCCGTCAGGGTCTTCACGAAGATTTGCAT 32229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934949031433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |