Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq65 116 3e-21 seq70 98.7 8e-16 >seq65 Length=170753 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||| || ||||| ||||| || || || | || | || ||| Sbjct 103702 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 103643 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| ||||| ||||| ||||| || |||| |||| ||||||||||| | Sbjct 103642 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 103583 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | | || || | |||||||| | ||||||||| || Sbjct 103582 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 103523 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||| || |||||||||||||| Sbjct 103522 CCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || ||||||||||| || || ||| | ||| |||| || Sbjct 103474 ACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCCTCA 103415 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || ||||| ||||| || |||| |||| |||||||||||| Sbjct 103414 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 103355 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || |||| ||| ||||||| || || || || Sbjct 103354 ATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 103295 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || || |||||||| Sbjct 103294 CCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||||| |||| ||| || || || ||||||||||| || | || | || || | ||| Sbjct 103925 ATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 103866 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || || || ||||| ||||| || |||| || | ||||||||| || ||||| Sbjct 103865 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 103806 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | | || |||| ||| || |||| |||||| || ||||| || Sbjct 103805 GGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGT 103746 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||| || || || || ||||| Sbjct 103745 GAGAGTCTTGACGAAGATTTGCAT 103722 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | |||||| || || |||||||| || || || ||||| || Sbjct 104177 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 104118 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | | | || |||| |||||| || ||||| |||| ||||| || |||| || Sbjct 104117 CAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGG 104058 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||| || |||||| || || | | | || || | ||| || Sbjct 104057 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 103998 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||||| || ||||| ||||| || || || ||||||||||| Sbjct 103997 CTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950 >seq70 Length=162585 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || |||||||| || || | || | || || Sbjct 32021 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 32080 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||| ||||| || |||| ||||| ||||||||||| Sbjct 32081 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 32140 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || |||| ||||||||| | || || || || Sbjct 32141 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 32200 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||| || || || || || ||||| Sbjct 32201 CCCGTCAGGGTCTTCACGAAGATTTGCAT 32229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934949031433