Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8 120 9e-22 seq98 111 5e-19 seq39 109 2e-18 seq57 102 2e-16 >seq8 Length=444409 Score = 120 bits (132), Expect = 9e-22 Identities = 343/515 (67%), Gaps = 22/515 (4%) Strand=Plus/Minus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||| ||||| ||||||||||||||||| ||||| || |||||||| | |||||||| | Sbjct 100100 TGCGCCGTGGGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAATCCACCATCTCT 100041 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| ||||||| | || ||| | | || || ||| | | || Sbjct 100040 GGCACGACCCTCCACAGGCTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 99981 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661 ||| || | |||||||| | |||||||||||| | | |||||| | ||| | || Sbjct 99980 GATCTTGTCGTCGACCATATGTCTCAGACGCTGGTAGTACGTGGGACCCAAGAACACCTG 99921 Query 251662 CTCGA-AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720 | | | | || |||| || || || ||| ||||| || ||| ||| ||| | Sbjct 99920 CGCAACAAGC--TTGCGG-CCTGTGTGACCGTGGTACATGACCTCGAAGCCACGAGACTG 99864 Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAA---TATCACCAATCTTGAATTTGCTAAAACT 251777 ||||| | | | || || | || | ||| || | || | | | || Sbjct 99863 GTAACCCATGTCACGAAGACGCGACGAAACGCTGTCAACAGT---GACATCGGTGAAGGG 99807 Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTG--AATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835 |||| |||| || | || || | || |||| ||| | | || | ||| || Sbjct 99806 GGTGGCGTCGCCCTCTTTTCCGATGAGCGAAGCAAC-CTTCGAC-AATTGACACTCAATC 99749 Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 | || || || ||||||||| ||||| || ||||| |||||||||| ||| || Sbjct 99748 AAATGAGCAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACA 99689 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCC 251952 | || || |||||| |||||||||| ||| | ||| || | ||||| |||||| Sbjct 99688 ATACCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCAATTGTTCCC 99632 Query 251953 TTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||||||||| ||||||||||||||| Sbjct 99631 TTCTGTCCGTGACGAGAGGCGAACTTATCACCAAT 99597 >seq98 Length=123527 Score = 111 bits (122), Expect = 5e-19 Identities = 200/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431 || || || || |||||||| || | || | ||||| || | ||||| |||||| | Sbjct 98312 CTCATCGACACATACATCAAGGAGCAGGCTCA-ACGCACATACCTCTTCAATGCCATT-G 98255 Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 || ||||||| || || ||||| | |||||||| ||| |||||||| || ||| Sbjct 98254 AGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGG 98195 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 | | | || ||| ||||||||||| || |||| || ||||| || || ||| || Sbjct 98194 ATTCCACCTTCGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTG 98135 Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 | | ||| ||| ||||| ||||| || || ||||| | | |||| ||| |||| Sbjct 98134 GCTCCTTCGCCTCCATTTTCTGGCTCAAGAAACGTGGCCTCATGGCTGGCCTGACCTTTT 98075 Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || || || | ||||||| || ||||| || || ||| Sbjct 98074 CCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCC 98028 >seq39 Length=231448 Score = 109 bits (120), Expect = 2e-18 Identities = 571/903 (63%), Gaps = 15/903 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || ||||||||| ||||||||| || || |||||| || | ||||||||||| Sbjct 101944 GTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTT 102003 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| |||||||||||||| | ||| | ||| |||||||||| |||| | Sbjct 102004 GCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGA 102063 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | |||| || || |||| | || ||| Sbjct 102064 CTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTT 102123 Query 155810 CTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 ||| || | || |||| | | || || |||||| || || ||||||||| Sbjct 102124 CTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACGTCCGCCAATCCAGGGCA 102183 Query 155870 CTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATAC 155926 | | |||||| | || | ||| || || || ||||||| ||| || | Sbjct 102184 TTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCG---ACACGCTTCATGAAGAG 102240 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGAT 155985 ||| ||| | ||| ||||| | ||| | | | ||| ||||| | |||||| | Sbjct 102241 ATCCGGGATCCAGAGAGCGTAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGGT 102299 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| | || || | ||| || | ||| | || |||||| | || || || | Sbjct 102300 TCTTTCTCAGGTCCAGGAACTCGAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGA 102359 Query 156046 AACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || ||| | | |||||||| || || || |||| || || || || || || | Sbjct 102360 AAGCACCGGGGCGCTTGTTGCCACCTTGGTCAACGTACCTCGCGGTGTTGTTAAACACGC 102419 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGA-ATATGCGAACCAGA 156160 ||||| |||| ||||| || || | || ||||| || |||| ||||| ||||| Sbjct 102420 GGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCGATGTATGC--ACCAGT 102477 Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 | || | | ||| || | | ||| ||||| || | || || || || || Sbjct 102478 GGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACA 102537 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 | ||| | || | | ||||| |||||| ||| || | ||| | | |||| Sbjct 102538 TGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCA 102597 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 || | || | ||||||| ||||| ||||| ||||| || | || || | || Sbjct 102598 GGACGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 102657 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400 || || |||||| | ||||||||| | ||||||||| || |||||||| Sbjct 102658 GTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAAT 102717 Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460 | | | || | ||| ||| ||||| || | ||| | | | ||||||| || Sbjct 102718 GCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTCAGCGACCTTGCCATCAAGGCG 102777 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTT 156520 |||||||| | || || ||||| || || ||||| || | | |||||||||| Sbjct 102778 GAGAAGGTAGGATCGCTCAAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGGTC 102837 Query 156521 GTA 156523 ||| Sbjct 102838 GTA 102840 >seq57 Length=193346 Score = 102 bits (112), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| ||||||||| Sbjct 116028 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 116084 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||| || || | || |||| |||||||| ||| ||| || |||| Sbjct 116085 AAATGGAAAGTATTGAGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGA 116144 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 116145 ATACCGACCATCTCGCCAGG 116164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806832274427