Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq98 132 6e-25 seq14 125 9e-23 seq39 122 1e-21 seq44 86.0 8e-11 >seq98 Length=123527 Score = 132 bits (146), Expect = 6e-25 Identities = 205/287 (71%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | |||||| ||||| ||||| | ||||||||| || || Sbjct 98046 ACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGCCATGAGGCCACGTTT 98105 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| || |||| | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 98106 CTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAA 98165 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 | | | ||| |||| || |||||| || || | |||| ||||||| | | |||| Sbjct 98166 GGCAACGAGACGCTGAGCGAAGGTG--GAATCCTTATCTTG--GATCCACCTAACTGCCC 98221 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTT 869416 |||||||||| ||| | | | || | || || ||||| ||||||| || | | Sbjct 98222 AGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTGAAGAGGTATGTGC-GT 98280 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| | ||||||| || |||||||| ||||| || || ||||| Sbjct 98281 TGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 98327 Score = 123 bits (136), Expect = 3e-22 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||| | |||||| |||||| ||||||||||| || | | ||||| |||||| Sbjct 97740 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAAGGAGATGTTCTCCAT 97799 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||||| ||| ||| ||||| || ||||| | Sbjct 97800 GAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCT 97859 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| ||||| Sbjct 97860 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 97919 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | ||| ||| ||||| | |||||| |||||||||| Sbjct 97920 GGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACGGCCTCG 97965 >seq14 Length=367936 Score = 125 bits (138), Expect = 9e-23 Identities = 127/163 (78%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189 ||||||| || |||| ||| | ||||| || | ||||| ||| | ||||||||| Sbjct 345970 GTGGGACCAGAAGTTCATGCAA-GTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCT 345912 Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||||| ||||||||||| || |||||| | ||||||||| | ||||| || |||| Sbjct 345911 CCAACTACCTGGACATCAAGCCGCTCCTCGATGTCGGGTGCAAGACGGTGGCGAATATGA 345852 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 | ||||| ||| ||||||||||| | ||||| ||||| || Sbjct 345851 TTAAGGGGAAGAGTCCCGAGGAGATTAGGAAGACGTTTAATAT 345809 >seq39 Length=231448 Score = 122 bits (134), Expect = 1e-21 Identities = 272/409 (67%), Gaps = 6/409 (1%) Strand=Plus/Minus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152 || || |||||||||||| | || || |||||| |||| ||| || || | Sbjct 46817 CAGCTATGGCGAGTCGCATTGTCTCTCGGTGGGATGCATCGTCGATGGCTGCCCCCCAGG 46758 Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212 ||| || |||| ||||| |||||||||||| || || |||||||| |||||| | Sbjct 46757 AATGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACCCGTCGCCGACCCGGCCAGAG 46698 Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272 ||| || | ||||| ||| ||||| || | || ||||| || ||||| ||| Sbjct 46697 CGCCCTGACGACGCCCCGCGACGAGAAGGACCAGATCGAAATCCACTCTGGCACCGAGTT 46638 Query 18273 CGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGT 18332 |||| |||| || || | || ||||| | | || ||||| |||||||| ||| Sbjct 46637 CGGCGTCACCCTGGGTACACCAATCGGCATGCTCGTCCGCAACCAGGACCAGCGTCCCAA 46578 Query 18333 CGACT------ATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTA 18386 |||| | || |||| | | ||||| || || |||||||||| || || Sbjct 46577 GGACTACGGAAACTCGACCATGGACCTCTTCCCGCGCCCATCGCACGCCGACTGGACATA 46518 Query 18387 CATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGAC 18446 | | | ||||||||| ||||||| |||||||| || || || || |||||||| Sbjct 46517 CCTCGAGAAGTACGGCGTCAAGGCCAGCTCGGGCGGTGGGCGTAGCTCCGCGCGCGAGAC 46458 Query 18447 CCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCTCGGTCTC 18495 | | | || || ||||| || | || || |||| ||| | ||| Sbjct 46457 TATTGGGAGAGTGGCAGCCGGGGCAATTGCAGACAAATACCTCCGCCTC 46409 Score = 116 bits (128), Expect = 5e-20 Identities = 122/159 (77%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 ||||||||||||| ||||| || || ||||| | || || || || ||||| | Sbjct 46188 AGGACAGCATCGGTGGCACCGTCACCTGCGTCATCAGGAATGTCCCCAGCGGTCTCGGTG 46129 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| ||||| |||||||| |||||| |||||||||||||||||| ||||| |||| Sbjct 46128 AGCCCTGCTTCGACAAGATGGAGGCCATGCTCGCCCACGCCATGCTCAGCATCCCCGCCA 46069 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||||| || ||||| ||| ||| || |||| |||| Sbjct 46068 CCAAGGGCTTTGAGATCGGCTCCGGCTTCGGCGGCTGCG 46030 Score = 116 bits (128), Expect = 5e-20 Identities = 182/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | ||| |||| |||||| |||||||||||||| |||| ||||| || Sbjct 102386 TGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATGGGAACGATACCGTTCGAG 102445 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| || || | ||| || | || | || ||| Sbjct 102446 TTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 102505 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||| ||||| | || || ||| ||||| ||||| ||||| ||||| Sbjct 102506 ATACCTCCGGCAGTCTTTGAGATCATGGCACA-TGTCTTGAGTGTGTCATAGATACCCTC 102564 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| || | ||||| ||||| || | || | || || Sbjct 102565 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACC 102624 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 102625 AGCATTGAAGAGTGTTGG 102642 >seq44 Length=217134 Score = 86.0 bits (94), Expect = 8e-11 Identities = 176/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 1852061 TCGCTGGCGCTCATCTT-GCCGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTG 1852119 ||||||||||||||||| ||||| |||| ||||| || | | | ||| | ||||| Sbjct 119253 TCGCTGGCGCTCATCTTCGCCGC-CTCGCCCAGGCCGGGGATCATGGTGTTCATTAGGTG 119311 Query 1852120 -GAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTGC 1852178 | | | | | || || | | || |||| || || |||| || ||||||| Sbjct 119312 AGCACGGACTTTG-TATCCAATGCGAGGGAGGTTCTCCATAGCGAAGGTGAAGATCTTGC 119370 Query 1852179 GCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCA 1852238 ||||||| ||||| ||||| || ||||||||||||| |||||| || || ||||||| Sbjct 119371 GCTGGTCCACGCCGCCGAACTGCGCATCGACGTCGAGGTACTGCTCATCCAGCGCCTGCA 119430 Query 1852239 TGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTG-CGGTCCATCTTGACCACCTGAGCG 1852297 | | ||||| | || | ||| ||||| | |||| | |||||| |||| ||| Sbjct 119431 TCAATGGGTAAATCAATCCCCCCAGCGTCGGGTCGTCGGT-CTGCTTGACTACCTCCGCG 119489 Query 1852298 GCGGCCTTTTGCGC 1852311 |||| || || || Sbjct 119490 CCGGCTTTCTGGGC 119503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107092341066007