Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq98 147 3e-29 seq14 122 1e-21 seq39 98.7 2e-14 seq44 96.9 5e-14 seq144 87.8 3e-11 >seq98 Length=123527 Score = 147 bits (162), Expect = 3e-29 Identities = 233/329 (71%), Gaps = 5/329 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| |||| ||||| | ||||||||| || || Sbjct 98046 ACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGCCATGAGGCCACGTTT 98105 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || |||| ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 98106 CTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAA 98165 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||||| |||| || || ||| | || | | | | ||||||| | | ||||| Sbjct 98166 GGCAACGAGACGCTGAGCGAAGGTG--GAATCCTTATCT-TGGATCCACCTAACTGCCCA 98222 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578 || ||||| ||| | | | || | || || ||||| ||||||| || | | | Sbjct 98223 GTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTGAAGAGGTATGTGCGT-T 98281 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 || | ||||||| ||| |||||||||||||| ||||| ||||| | ||| ||||| | Sbjct 98282 GAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCT 98341 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| ||| ||||| || || |||||| Sbjct 98342 CGATCATGATTTGGAAACCGTAGAAGCAG 98370 Score = 125 bits (138), Expect = 1e-22 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | |||||| |||||| ||||||||||| || | | ||||| |||||| Sbjct 97741 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAAGGAGATGTTCTCCATG 97800 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| || | ||||| ||||||| ||||| || ||||| | | Sbjct 97801 AAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 97860 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 97861 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 97920 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||| | |||||| |||||||||| | |||| Sbjct 97921 GGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACGGCCTCGGTAATGA 97972 >seq14 Length=367936 Score = 122 bits (134), Expect = 1e-21 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 ||||||||| | ||||| ||| | ||||||||| |||||||||| ||||||||||| Sbjct 345948 GTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCTCCAACTACCTGGACATCAAGCCG 345889 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 ||||||||| | ||||||||||| ||||| || | || ||||| ||| |||||||| Sbjct 345888 CTCCTCGATGTCGGGTGCAAGACGGTGGCGAATATGATTAAGGGGAAGAGTCCCGAGGAG 345829 Query 2035734 ATCCGCAAGACCTTTAACAT 2035753 || | ||||| ||||| || Sbjct 345828 ATTAGGAAGACGTTTAATAT 345809 >seq39 Length=231448 Score = 98.7 bits (108), Expect = 2e-14 Identities = 176/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | ||| |||| |||||| |||||||||||||| || | ||||| || Sbjct 102386 TGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATGGGAACGATACCGTTCGAG 102445 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||| || || | ||| || | || | || ||| Sbjct 102446 TTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 102505 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 102506 ATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCA 102565 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 102566 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 102625 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 102626 GCATTGAAGAGTGTTGG 102642 Score = 89.7 bits (98), Expect = 8e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||| | ||| | |||||||||| || | || || ||| || || || || Sbjct 102191 GGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATC 102250 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 || || |||| || | || || || ||| ||||||||||||||||||||| ||||| Sbjct 102251 CAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGG 102310 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || || | |||| || || |||||||| ||||| | |||| ||| || || || | Sbjct 102311 TCCAGGAACTCGAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCGGGG 102370 Query 2071999 CGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 102371 CGCTTGTTGCCACC 102384 >seq44 Length=217134 Score = 96.9 bits (106), Expect = 5e-14 Identities = 385/586 (66%), Gaps = 34/586 (6%) Strand=Plus/Plus Query 2411404 TCGCTGGCGCTCATCTT-GCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTG 2411462 ||||||||||||||||| |||| ||| | ||||| || | || | ||| | ||||| Sbjct 119253 TCGCTGGCGCTCATCTTCGCCG-CCTCGCCCAGGCCGGGGATCATGGTGTTCATTAGGTG 119311 Query 2411463 GATGCG--CTTGCGGTAGCCCA-GCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTT 2411519 || ||| ||| || | ||| || |||| || || |||| |||||||| Sbjct 119312 AGCACGGACTTT--GTATCCAATGCGAGGG-AGGTTCTCCATAGCGAAGGTGAAGATCTT 119368 Query 2411520 GCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 2411579 ||||||||| ||||| ||||| || ||||||||||||| |||||| || || ||||| Sbjct 119369 GCGCTGGTCCACGCCGCCGAACTGCGCATCGACGTCGAGGTACTGCTCATCCAGCGCCTG 119428 Query 2411580 CATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGG 2411638 ||| | ||||| | | | |||| ||||| | |||| | |||||| |||| | Sbjct 119429 CATCAATGGGTAAATCAATCCCCCCAGCGTCGGGTCGTCGGT-CTGCTTGACTACCTCCG 119487 Query 2411639 CGGCGGCCTTTTGCGCCGTGCCGACGGTCACGCG-----CGCCGTC-AGGCGCAAGAGGT 2411692 || |||| || || | ||||| | | ||| |||| || || ||| | | Sbjct 119488 CGCCGGCTTTCTG------GGCGACGCTAATGCGCGTTACGCCTTCGAGCTTGAAGCGAT 119541 Query 2411693 CGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCA 2411752 | | ||||| | ||| ||||||| ||| || | || |||||||| || | | Sbjct 119542 CCATGGTGTATTCCTTGCCCAGCTGGTAGGAGCTCCCCAGGACGAATTCGAG--GAGCGA 119599 Query 2411753 GCGG--GACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACT--CGTACCA-GCGGCA 2411807 | || ||||| | | |||| | ||| ||||| || || ||| | || || Sbjct 119600 GAGGTCCACGCCGACGGCGCGGAGGAGGGCTTTGAT--TAACCTGCTGTAGTAGGCTGC- 119656 Query 2411808 CCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGC 2411867 ||| ||||||||| || |||| ||| || ||||||| | | || | || || Sbjct 119657 GCGGAACTCGACGAGCTCGAGAGGCGCCTTCATGTTATCGAGGTAGCCATGTATATCCGC 119716 Query 2411868 AAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCAC 2411927 || || ||| | || | ||||| || ||| | ||||| | || | |||||| || Sbjct 119717 CAACAGAATCTTGACGTGGCATCCTGCGGCGAGGAGCTCGGCGATCTTGATGATGGGGAC 119776 Query 2411928 AAAGTA-GCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATA 2411972 ||||| || ||| || || ||||| | ||||| ||||| || Sbjct 119777 GAAGTATGCACAG-TGAGGGCGCCCCGTGGTGGCGGTTCCCCAGTA 119821 >seq144 Length=63102 Score = 87.8 bits (96), Expect = 3e-11 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 || ||||| ||| | |||| || || |||||||| || | ||||| | ||||| || Sbjct 17232 GGACGCCAAAAGCTTGTCATTCTTGACGAGGCCGATAGCATGACGTCTGGTGCCCAACAA 17291 Query 2019264 GCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAA 2019322 ||||| || ||| |||||||| | ||| | || || || || || | || ||||| Sbjct 17292 GCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATTCGCATGCAA 17350 Query 2019323 CACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCG 2019382 ||| | | ||||||| |||| ||| ||||||||||| || |||| |||| | Sbjct 17351 TCAGTCCAACAAGATCATCGAGCCCCTGCAGTCACGTTGCGCCATATTACGCTATGCGAG 17410 Query 2019383 CCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439 || || || || || ||| ||| || | | | |||||||| || || ||||| Sbjct 17411 GCTGACGGATGCACAAGTCGTGAAGCGCCTACTCCAAATTATCGAGGCGGAGAAGGT 17467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916185660125669