Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq98 181 2e-39 seq39 125 1e-22 >seq98 Length=123527 Score = 181 bits (200), Expect = 2e-39 Identities = 352/507 (69%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 98583 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATC 98525 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | ||||| |||||| | |||||| Sbjct 98524 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCT 98465 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| || || ||| |||||||| || || || || ||||||||| || Sbjct 98464 CCCACGTTCTGGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 98406 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | |||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 98405 CGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 98346 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | | Sbjct 98345 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 98286 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| ||||| || || | || | | | ||| ||||| Sbjct 98285 GCTCA-ACGCACATACCTCTTCAATGCCATTGAGACCATTCCTTGCATCAAGAAGAAGGC 98227 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || ||| || |||| ||||| Sbjct 98226 CGACTGGGCAGTTAGGTGGATC--CAAGATAAGGATTCCAC-CTTCGCTCAGCGTCTCGT 98170 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| || || || ||||| ||||| ||||| ||| ||| | |||| || ||||| Sbjct 98169 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATTTTCTGGCT 98110 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||| || ||||||||| | || || Sbjct 98109 CAAGAAACGTGGCCTCATGGCTGGCCT 98083 Score = 89.7 bits (98), Expect = 7e-12 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||||||| |||||| | ||||| | | ||| | || || ||||| |||| Sbjct 97965 CGAGGCCGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 97906 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 97905 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 97848 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 97847 TCCCTCGGTAACG-AGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACAT 97789 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769 ||| | | || ||||||||||| |||||| ||||| | ||| ||| ||| | || Sbjct 97788 CTCCTTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGG 97729 Query 1456770 CGTCA 1456774 |||| Sbjct 97728 TGTCA 97724 >seq39 Length=231448 Score = 125 bits (138), Expect = 1e-22 Identities = 358/543 (66%), Gaps = 22/543 (4%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCTC 262938 |||||||||||| | || ||| | | |||||| || | |||||||| ||||| Sbjct 101511 TGGGACTGGGACTCTCTCAAGGCCCAGATCAAACAGCACGGTGTCCGCAACTCCCTGCTC 101452 Query 262939 GTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGAG 262998 || || | ||||||||| || | || |||||||| || ||| || |||| |||||| Sbjct 101451 GTTGCACCCATGCCCACTGCTTCCACCTCGCAGATTCTCGGCTTCAACGAGTGCTTCGAG 101392 Query 262999 GTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 ||| ||| ||||||||| | ||||| || || | ||||| || || ||||| Sbjct 101391 C-CATACACCTCAAACATCTACTCTCGCCGTGTCCTGGCTGGCGAGTTCCAAGTCGTCAA 101333 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 || | || ||||| | |||| | || || ||| | | || | |||| Sbjct 101332 CCCCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTCTGGTCTGACAACATGAAGAACCG 101273 Query 263118 GCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATC 263176 |||| || | || | || || | ||| | | | || | || |||| Sbjct 101272 CATCATCGCAG-ACGGAGGTTCCATCCAGAACATCCCCAACA------TCCCCGCCGACA 101220 Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGG 263233 ||||||| |||| ||||||||| |||||| | || | || ||||| | | |||| Sbjct 101219 TCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATGG 101163 Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293 | || ||||||| ||| |||| ||| |||||| |||||| | || | |||| Sbjct 101162 CCGCTGACCGCGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCACATGAAGGACC 101103 Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || || | ||| |||| || |||||| || ||| | ||||||||||| Sbjct 101102 CAACAATGGGCAAGA---TCACCTCCATGCACTTTGCTGGCTGGAAGCTCGGCCTCAAGA 101046 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | ||||||||||| || |||||| | |||| | | | || |||||||||||||||| Sbjct 101045 CCGGCATGTACTACCTCCGCACCATGGCCGCCTCGGCCCCTATCCAATTCACCGTCGATC 100986 Query 263411 AGG 263413 ||| Sbjct 100985 AGG 100983 Score = 122 bits (134), Expect = 1e-21 Identities = 185/261 (71%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| ||||| ||||| || | ||| Sbjct 102642 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGAC 102583 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| || || | ||||| Sbjct 102582 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCA 102523 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--CAAGG--TGCGCGCCGCGGGCGCCTA 260100 ||| | ||||| || ||||| || | ||| || | | || ||| | || || || Sbjct 102522 AAGACTGCCGGAGGTATCGGATT----GAACATCCATCGTATCCGTGCCACTGGTGCATA 102467 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || |||||||| | || ||||| | || |||||||| ||||| |||||| | Sbjct 102466 CATCGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTGTTTAACAA 102407 Query 260161 CACGGCGCGCTACGTCGACCA 260181 ||| ||| | ||||| ||||| Sbjct 102406 CACCGCGAGGTACGTTGACCA 102386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177756126000502