Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq98 132 7e-26 >seq98 Length=123527 Score = 132 bits (146), Expect = 7e-26 Identities = 369/563 (66%), Gaps = 16/563 (3%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| || | || | ||||| ||||| || || Sbjct 98025 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAG 98084 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||| ||| || ||||| || |||||||| || |||| || || || ||||| ||||| Sbjct 98085 GCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCAGAGAAGAA 98144 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TG 39792 ||| || || || || || || ||||| || | || || | | | ||| ||| || Sbjct 98145 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGAATCCTTATCTTG 98204 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| | |||||| || || |||||||| | ||||| || || || || ||||| Sbjct 98205 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATT 98264 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| || | | || || | ||||| || || | || || Sbjct 98265 GAAGAGGT-ATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 98323 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || | || ||||| || ||| || || || ||||| || || | ||||| | | Sbjct 98324 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 98383 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| | || | || | || || || || ||||| ||| |||| Sbjct 98384 TCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 98443 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084 | || || |||| || || || || || ||||| |||| | || Sbjct 98444 CGAAGAAAGCCAGAACGTGGGAGATGAAGTAGCGCTCATC----GTCATTGAGGCGGTTG 98499 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||| | | || || || | ||| | || || |||||||| || ||||| || Sbjct 98500 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCC 98559 Query 40145 GCCTTTTTGTACATGTTCCATAT 40167 ||||| |||||||| | ||| || Sbjct 98560 GCCTTCTTGTACATCTGCCAGAT 98582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903897188440