Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq65 167 7e-36
seq100 89.7 2e-12
seq57 87.8 5e-12
>seq65
Length=170753
Score = 167 bits (184), Expect = 7e-36
Identities = 178/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| ||||| || || ||||| || ||||| || |
Sbjct 103728 TTTGCATACCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGT 103669
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || ||||||||||| || || ||||| |
Sbjct 103668 AGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGT 103609
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| |||||||| || || || || ||||| || | || || |||||||| | ||| ||||
Sbjct 103608 CCGGAGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATG 103549
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| |||| ||||| || || || || || ||||||||||||||
Sbjct 103548 ATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494
Score = 132 bits (146), Expect = 1e-25
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||||||||| | || ||||| || || || || |||||
Sbjct 103952 CATACCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATC 103893
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 103892 AGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 103833
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || ||||| || || || | || || ||||| || | ||| || | ||
Sbjct 103832 TGGGATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTC 103773
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || |||| |||||||||||| || || || || || || |||||
Sbjct 103772 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722
Score = 107 bits (118), Expect = 6e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || || ||||| || || || || || ||
Sbjct 103268 CATACCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 103209
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| || || || ||||| ||||||||||| || ||
Sbjct 103208 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 103149
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||| || || || || || || ||| || || || || || | |||||| | ||
Sbjct 103148 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAACGTTGTCGATGGTATCAGACGATT 103090
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || ||||| || | ||||| || ||
Sbjct 103089 CGACCTCAAGGGTGATGGTCTTGCCAGT 103062
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| |||||||| ||| || || || || || || | || | |||||| || |
Sbjct 104156 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCA 104098
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| | ||| ||||| || || || || || || ||||||||||
Sbjct 104097 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 104038
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || ||||| | || || | ||||| || || |||| |||||||
Sbjct 104037 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 103978
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || | || || || |||||||||||
Sbjct 103977 CAGTCAAGGTCTTGACGAAAATCTGCAT 103950
>seq100
Length=120018
Score = 89.7 bits (98), Expect = 2e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||| || || || || |||||||||||
Sbjct 34482 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 34541
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || ||||| || ||||||||||| || || ||||| || || | || ||||| ||
Sbjct 34542 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 34601
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| | ||| || | || || ||||| || | ||||| || ||
Sbjct 34602 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 34645
>seq57
Length=193346
Score = 87.8 bits (96), Expect = 5e-12
Identities = 102/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| | || || ||| || || | ||||||||||| |||||||||||
Sbjct 116043 CGCGGCACACCAAGGGTGACGTTC---TTGGACGACACACCAGCAAAATGGAAAGTATTG 116099
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||| || || || || |||| || || ||||| ||
Sbjct 116100 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 116159
Query 377578 CCAGGATTGACAATAGC 377594
||||| ||||| | |||
Sbjct 116160 CCAGGGTTGACCAGAGC 116176
Score = 86.0 bits (94), Expect = 2e-11
Identities = 208/315 (66%), Gaps = 0/315 (0%)
Strand=Plus/Plus
Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179
||||| ||||| |||||||| |||||| ||||| | | | ||| || || ||
Sbjct 116726 ATCAAGACCATCCTCTCCATAAATGAATTGGACAATGTCGCCAAGAGAGTTCCTAACGGT 116785
Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239
||||| | ||||| | |||||| | || || | || || || || |||||
Sbjct 116786 TCCGTCATACTTGACCATGACATCTTCCAGCGCCTTGACGAGACGACGCTGGATGTAACC 116845
Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299
||||| ||| || || ||||||||||| | ||| |||||||| |||| || |||||
Sbjct 116846 AGTTTCGGCAGTCTTGACAGCAGTATCAATGAGACCCTCACGACCAGCCATGGCGTGGAA 116905
Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359
|| || || | || || || || | | | || |||||| ||| || | | |
Sbjct 116906 AAAGAACTCGGATGGTGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTC 116965
Query 378360 TGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAAT 378419
|| || | ||||| ||||| |||| || | || || | || || || | |||||
Sbjct 116966 GGGAGAGTAATCATCCTTTGTGAAATGCGGCAGGGTGCGGTACTTGAATCCGAAGGGAAT 117025
Query 378420 TCGTTTTCCATCAAC 378434
|| || || |||||
Sbjct 117026 ACGCTTACCCTCAAC 117040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515243314493513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |