Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq39 223 4e-53 seq98 116 4e-21 >seq39 Length=231448 Score = 223 bits (246), Expect = 4e-53 Identities = 481/712 (68%), Gaps = 22/712 (3%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 102687 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 102630 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| ||||| ||||||| |||| | |||||||| || Sbjct 102629 ATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATA 102570 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || || |||||| |||||| ||||| ||| | || | Sbjct 102569 GTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAGACTGCCGGAG 102510 Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 ||||||| | || | ||| | ||||||| | || || ||| || || || Sbjct 102509 GTATCGGATTGAACATCCATCGTA--TCCGTGCCACTGGTGCATACATCGCCGGTACCAA 102452 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 ||| | | | || ||||| || ||||||||||| || |||||||| || ||||||| Sbjct 102451 CGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTGTTTAACAACACCGCGAGGTACGT 102392 Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 |||| ||||| |||||| || | |||||||||||| ||||||| |||||||| Sbjct 102391 TGACCAAGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATCTACGTCGAGCCATGGCACGC 102332 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658 || | | ||||| || || ||| | ||| || || | || || | || ||| Sbjct 102331 GGATGTCTTCGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCCG 102272 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||| |||| ||| ||||| ||||| ||||| ||||||||| | || |||||| ||| Sbjct 102271 TGACTTGTTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACG 102213 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| ||| |||||||| ||||| ||||| || | || || ||||| || | Sbjct 102212 GCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTTACGGCGATG 102153 Query 53778 AGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCGCTACAAGAAGAAGG 53831 |||| | | | | || || | | | | | | |||| ||| |||| Sbjct 102152 AGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC------AAGACCA 102099 Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891 ||||||| | || | ||| | | || ||| || ||| ||||| |||| || | Sbjct 102098 TCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 102039 Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 ||||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 102038 TCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 101987 Score = 104 bits (114), Expect = 3e-17 Identities = 299/450 (66%), Gaps = 15/450 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | ||||| | ||| | Sbjct 101466 CGCAACTCCCTGCTCGTTGCACCCATGCCCACTGCTTCCACCTCGCAGATTCTCGGCTTC 101407 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||||||| ||||| ||| || || ||| Sbjct 101406 AACGAGTGCTTCGAGCCATACACCTCAAACATCTACTCTCGCCGTGTCCTGGCTGGCGAG 101347 Query 55604 TTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || || | || ||| | ||| || ||||||| || | || ||| Sbjct 101346 TTC--CAAG-TCGTCAACC-CCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTCTGGTC 101291 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGA 55715 | || |||| || || | || || ||| || ||| ||||||| || | Sbjct 101290 TGACAACATGAAGAACCGCATCATC-GCAGA-CGGAGGTTCCATCCAGAACATCCCCAAC 101233 Query 55716 TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 ||| | || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 101232 ATCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATC 101173 Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834 | | ||| ||||| || || || | |||||| ||||||||||| || |||||| | Sbjct 101172 GTCCAGATGGCCGCTGACCGCGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCAC 101113 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGA 55894 ||| || | || || ||| |||| | | ||| ||||||||| || |||||| || Sbjct 101112 ATGAAGGACCCAACAATGGGCAAGATCACCTCCATGCACTTTGCTGGCTGGAAGCTCGGC 101053 Query 55895 CTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 101052 CTCAAGACCGGCATGTACTACCTCCGCACC 101023 >seq98 Length=123527 Score = 116 bits (128), Expect = 4e-21 Identities = 333/508 (66%), Gaps = 12/508 (2%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||| | ||||||| ||| || ||||| ||||| | ||| || |||| | Sbjct 98068 TCGTTGGAAAAGGTCAGGCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCG 98127 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| ||| ||||||||| || || || || ||||| || || || || ||||| Sbjct 98128 AAGGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAG 98187 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | | ||| | || ||||| | ||||| || || || |||| ||| Sbjct 98188 GTGGAATCCTTA-TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGG 98246 Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTC 75025 | || || || || | ||||||| || | | | ||||||| | |||| Sbjct 98247 AATGGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTC 98306 Query 75026 AATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAA 75085 || | || ||||| ||||| | ||||| |||| | | ||| | ||||||| Sbjct 98307 GATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAA 98366 Query 75086 AGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATG 75143 | || || |||| ||||| || || | |||| || | || ||||| || Sbjct 98367 GCAGCGGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAG--GAGGTTCTCGTTG 98424 Query 75144 ACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCG 75203 || || ||||| || |||||||| |||||||| || ||| |||| |||||||||| Sbjct 98425 ACAATTCCGTCAGACGCGGCGAAGAAAGCCAGAACGTGGGAGATGAAGTAGCGCTCATCG 98484 Query 75204 TCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTC 75260 ||| ||| | |||| ||| || | |||||| | | |||||||||||| | ||| Sbjct 98485 TCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTC 98544 Query 75261 CAGAAACTCCCAATCGCCTTTTTGTACA 75288 |||||| | | |||||| ||||||| Sbjct 98545 CAGAAAGACGCTTCCGCCTTCTTGTACA 98572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212094245800