Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201
6-06-24] 571 sequences; 32,206,309 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq70 107 2e-18
seq65 93.3 4e-14
>seq70
Length=162585
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| ||| || || || || ||||| | ||| || || | || ||
Sbjct 32021 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 32080
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| |
Sbjct 32081 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 32140
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || |||| | | | |||||| ||||||||| || | |||||| | ||
Sbjct 32141 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 32200
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||||||| || || || |||||||||||
Sbjct 32201 CCCGTCAGGGTCTTCACGAAGATTTGCAT 32229
>seq65
Length=170753
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || ||| || || ||||| || |||| || || || |||| |||
Sbjct 103474 ACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCCTCA 103415
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| |||||||| || || || ||||||||||| | || | || ||| |||||| |
Sbjct 103414 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 103355
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| ||| || | | | | || ||| |||||| || |||| ||||| | ||
Sbjct 103354 ATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 103295
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || || ||||| |||||
Sbjct 103294 CCAGTGAGGGTCTTGACGAAGATCTGCAT 103266
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||||| |||| ||| || || || || ||||| | || || || | || || |||||
Sbjct 103925 ATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 103866
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTT 39199
|||||||| || || || |||||||||| ||||||| | || ||| || || ||| |
Sbjct 103865 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTTGGATCT 103807
Query 39200 TCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| |||| | | | ||||| |||||| || |||| ||| || | ||||| |
Sbjct 103806 TGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGG 103747
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || |||||||||||
Sbjct 103746 TGAGAGTCTTGACGAAGATTTGCAT 103722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429542610765323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |