Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq39 161 1e-34 seq98 113 6e-20 >seq39 Length=231448 Score = 161 bits (178), Expect = 1e-34 Identities = 403/612 (66%), Gaps = 0/612 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || |||| || |||||||||||||||| || |||||||| | | | Sbjct 102146 TCGAACTCATCGCCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 102205 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| || | | || || || ||||| |||||||| || ||||| ||||| || Sbjct 102206 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 102265 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | || |||| | ||| || || || |||||| | || || || ||||| | Sbjct 102266 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCGAAG 102325 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | |||||||| || | || || || | | | || || || || || || || Sbjct 102326 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCGGGGCGCTTGTTGCCACCT 102385 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | || || |||||||| ||| | || | | ||| |||| |||||||| || Sbjct 102386 TGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATGGGAACGATACCGTTCGAG 102445 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 |||| || || || | || || ||| | || || ||| | ||| | || Sbjct 102446 TTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 102505 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || ||||| || |||| || || | || || || | ||| || ||||||||||| Sbjct 102506 ATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCA 102565 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 ||||| || ||| |||||| | | || ||| |||| || || || || Sbjct 102566 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 102625 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 ||||| || | ||| || || || || || || |||| ||| | || |||||||| Sbjct 102626 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTC 102685 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || || | || || ||| ||||| || ||||| |||||||| | ||| ||| Sbjct 102686 TCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGC 102745 Query 78525 TGAGGTCTTTCA 78536 || || || ||| Sbjct 102746 TGTGGCCTCTCA 102757 >seq98 Length=123527 Score = 113 bits (124), Expect = 6e-20 Identities = 337/517 (65%), Gaps = 10/517 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| ||||| || || || | ||| || |||||||| |||||||| || || | ||| Sbjct 98068 TCGTTGGAAAAGGTCAGGCCAGCCATGAGGCCACGTTTCTTGAGCCAGAAAATGGAGGCG 98127 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || ||||| ||||| || || || ||||| || || || || | || || | Sbjct 98128 AAGGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAG 98187 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| || || | | ||||||| |||||| || ||||||||||| | ||||| Sbjct 98188 GTGGAATCCTTATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 98247 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417 || || || || ||||| ||||| | | || | ||| || || | ||| || | Sbjct 98248 ATGGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCCTGC--TCCTTGATGTATGTGT 98305 Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477 | || | || || | |||| |||||| || || || || || || ||||| | Sbjct 98306 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 98365 Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537 | || | ||||||| |||||| ||||| | | || || || | ||||| || | Sbjct 98366 AGCAGCGGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGA 98425 Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597 | ||||| ||| || || || || || | || || || || || || | | Sbjct 98426 CAATTCCGTCAGACGCGGCGAAGAAAGCCAGAACGTGGGAGATGAAGTAGCGCTCATCGT 98485 Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654 | | | | || |||||||| | | || || || | ||| | || || ||||||| Sbjct 98486 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCC 98545 Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | || || || || || || || ||||| | ||| || Sbjct 98546 AGAAAGACGCTTCCGCCTTCTTGTACATCTGCCAGAT 98582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663841801440