Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq39 150 3e-31 >seq39 Length=231448 Score = 150 bits (166), Expect = 3e-31 Identities = 400/608 (66%), Gaps = 6/608 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || |||| || |||| ||||| ||||| || || ||||| | | | Sbjct 102146 TCGAACTCATCGCCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 102205 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | || || || ||||| |||||||| || ||||| ||||| || Sbjct 102206 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 102265 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | || |||| | ||| || || || |||||| | || || |||||||| | Sbjct 102266 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCGAAG 102325 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | |||||||| || | || || || | | |||| || || || || || || Sbjct 102326 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCGGGGCGCTTGTTGCCACCT 102385 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | || || || ||||| ||| | || | | ||| |||| || ||||| || Sbjct 102386 TGGTCAACGTACCTCGCGGTGTTGTTAAACACGCGGAGCATGGGAACGATACCGTTCGAG 102445 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | || || || || | || || ||| ||||| ||| | || | || Sbjct 102446 TTTCCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 102505 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || ||||| || | || ||||| | ||||| || | |||||||||||| ||||| Sbjct 102506 ATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCA 102565 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 |||||||| ||| |||||| | | || ||| |||| || || || || Sbjct 102566 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 102625 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| || | ||| || || || || ||||| |||| ||| | || |||||||| Sbjct 102626 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTC 102685 Query 77060 TCAATAACTG-CTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATA 77116 || || || ||||| |||||| ||||| || || || |||||||| | ||| Sbjct 102686 TCGAT---TGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATG 102742 Query 77117 TGCTGAGG 77124 ||||| || Sbjct 102743 TGCTGTGG 102750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929311430720